RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 C12orf74Q32Q52 190 aa13.52□□□□□ -0.25
TRIM56-202ENST00000412507 WFDC1Q9HC57 220 aa13.52□□□□□ -0.25
TRIM56-202ENST00000412507 TRBV19A0A075B6N1 114 aa13.51□□□□□ -0.25
TRIM56-202ENST00000412507 C11orf94C9JXX5 98 aa13.51□□□□□ -0.25
TRIM56-202ENST00000412507 HBE1P02100 147 aa13.51□□□□□ -0.25
TRIM56-202ENST00000412507 GIPP09681 153 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-202ENST00000412507 HIST1H1EP10412 219 aaKnown RBP13.51□□□□□ -0.25
TRIM56-202ENST00000412507 SCGB1C1Q8TD33 95 aa13.51□□□□□ -0.25
TRIM56-202ENST00000412507 C2CD4CQ8TF44 421 aa13.51□□□□□ -0.25
TRIM56-202ENST00000412507 FAM167A-AS1Q96KT0 104 aa13.51□□□□□ -0.25
TRIM56-202ENST00000412507 LOC102723971A0A1B0GUV8 181 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 TMEM189A5PLL7 270 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 ZNF253O75346 499 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 LY6G6CO95867 125 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 RRN3P1Q2M238 152 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 FFAR4Q5NUL3 377 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 OR10J6PQ8NGY7 276 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 BLNKQ8WV28 456 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 TIMM9Q9Y5J7 89 aa13.5□□□□□ -0.25
TRIM56-202ENST00000412507 TRAV10A0A0B4J240 114 aa13.49□□□□□ -0.25
TRIM56-202ENST00000412507 NDUFB4O95168 129 aa13.49□□□□□ -0.25
TRIM56-202ENST00000412507 PRM2P04554 102 aa13.49□□□□□ -0.25
TRIM56-202ENST00000412507 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
TRIM56-202ENST00000412507 PARD6GQ9BYG4 376 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-202ENST00000412507 FUT9Q9Y231 359 aa13.49□□□□□ -0.25
TRIM56-202ENST00000412507 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-202ENST00000412507 IGLL5B9A064 214 aa13.48□□□□□ -0.25
TRIM56-202ENST00000412507 M0R3E3 92 aa13.48□□□□□ -0.25
TRIM56-202ENST00000412507 SPART-AS1P0CW21 52 aa13.48□□□□□ -0.25
TRIM56-202ENST00000412507 CDKN1BP46527 198 aa13.48□□□□□ -0.25
TRIM56-202ENST00000412507 PDE6HQ13956 83 aa13.48□□□□□ -0.25
TRIM56-202ENST00000412507 AKAP14Q86UN6 197 aa13.48□□□□□ -0.25
TRIM56-202ENST00000412507 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
TRIM56-202ENST00000412507 OR51M1Q9H341 326 aa13.48□□□□□ -0.25
TRIM56-202ENST00000412507 KIR3DS1Q14943 382 aa13.47□□□□□ -0.25
TRIM56-202ENST00000412507 Q5BKY6 102 aa13.47□□□□□ -0.25
TRIM56-202ENST00000412507 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
TRIM56-202ENST00000412507 EXOC3-AS1Q8N2X6 119 aa13.47□□□□□ -0.25
TRIM56-202ENST00000412507 PAXXQ9BUH6 204 aa13.47□□□□□ -0.25
TRIM56-202ENST00000412507 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
TRIM56-202ENST00000412507 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
TRIM56-202ENST00000412507 OR10J4P0C629 311 aa13.46□□□□□ -0.25
TRIM56-202ENST00000412507 NBEAP1P0C6P0 100 aa13.46□□□□□ -0.25
TRIM56-202ENST00000412507 MRPL53Q96EL3 112 aaKnown RBP13.46□□□□□ -0.25
TRIM56-202ENST00000412507 LINC01587Q99440 93 aa13.46□□□□□ -0.25
TRIM56-202ENST00000412507 PLA2G2EQ9NZK7 142 aa13.46□□□□□ -0.25
TRIM56-202ENST00000412507 DEFB131BA0A096LNP1 70 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 NPIPB6E9PJ23 425 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 OR7C2O60412 319 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 CT45A10P0DMU9 189 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 RNF141Q8WVD5 230 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 FXYD5Q96DB9 178 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 AAMDCQ9H7C9 122 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 APLNQ9ULZ1 77 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 PRELID1Q9Y255 219 aa13.45□□□□□ -0.26
TRIM56-202ENST00000412507 PFDN1O60925 122 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 AZU1P20160 251 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 TSPOP30536 169 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 TCTAP57738 103 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 ERCC8Q13216 396 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 ICAM4Q14773 271 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 TMEM256Q8N2U0 113 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 OR2T35Q8NGX2 323 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 ZNF503Q96F45 646 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 AQP10Q96PS8 301 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 NIPSNAP3BQ9BS92 247 aa13.44□□□□□ -0.26
TRIM56-202ENST00000412507 IGHV4-4A0A075B6R2 117 aa13.43□□□□□ -0.26
TRIM56-202ENST00000412507 TEX48A0A1B0GUV7 120 aa13.43□□□□□ -0.26
TRIM56-202ENST00000412507 J3KRW8 73 aa13.43□□□□□ -0.26
TRIM56-202ENST00000412507 EIF3GO75821 320 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRIM56-202ENST00000412507 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
TRIM56-202ENST00000412507 FAM122CQ6P4D5 195 aa13.43□□□□□ -0.26
TRIM56-202ENST00000412507 TCTE3Q8IZS6 198 aa13.43□□□□□ -0.26
TRIM56-202ENST00000412507 PHYHIPLQ96FC7 376 aa13.43□□□□□ -0.26
TRIM56-202ENST00000412507 VPS13DQ5THJ4 4388 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 KMT2AQ03164 3969 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 HTN1P15515 57 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 ACOT6Q3I5F7 207 aaPredicted RBP13.42□□□□□ -0.26
TRIM56-202ENST00000412507 KHDC3LQ587J8 217 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 HSD17B11Q8NBQ5 300 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 ST6GAL2Q96JF0 529 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 ODF3Q96PU9 254 aa13.42□□□□□ -0.26
TRIM56-202ENST00000412507 M6PRP20645 277 aa13.41□□□□□ -0.26
TRIM56-202ENST00000412507 LEPP41159 167 aa13.41□□□□□ -0.26
TRIM56-202ENST00000412507 TAS2R60P59551 318 aa13.41□□□□□ -0.26
TRIM56-202ENST00000412507 RAB2AP61019 212 aa13.41□□□□□ -0.26
TRIM56-202ENST00000412507 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
TRIM56-202ENST00000412507 ZNF266Q14584 549 aa13.41□□□□□ -0.26
TRIM56-202ENST00000412507 C20orf144Q9BQM9 153 aa13.41□□□□□ -0.26
TRIM56-202ENST00000412507 AGPAT4-IT1Q9H0P7 198 aa13.41□□□□□ -0.26
TRIM56-202ENST00000412507 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
TRIM56-202ENST00000412507 FXYD6-FXYD2A0A087WZ82 144 aa13.4□□□□□ -0.26
TRIM56-202ENST00000412507 PLAC8L1A1L4L8 177 aa13.4□□□□□ -0.26
TRIM56-202ENST00000412507 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
TRIM56-202ENST00000412507 TAS2R45P59539 299 aa13.4□□□□□ -0.26
TRIM56-202ENST00000412507 DAD1P61803 113 aa13.4□□□□□ -0.26
TRIM56-202ENST00000412507 LINC00477Q96M19 166 aa13.4□□□□□ -0.26
TRIM56-202ENST00000412507 TRAV12-3A0A0B4J271 114 aa13.39□□□□□ -0.27
TRIM56-202ENST00000412507 H7BYZ3 331 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms