RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 C1QTNF4Q9BXJ3 329 aa16.25■□□□□ 0.19
PTCD3-203ENST00000409783 A0A0D9SG52 128 aa16.24■□□□□ 0.19
PTCD3-203ENST00000409783 M0R3E3 92 aa16.24■□□□□ 0.19
PTCD3-203ENST00000409783 HIST1H1AQ02539 215 aaPredicted RBP16.24■□□□□ 0.19
PTCD3-203ENST00000409783 MRPL53Q96EL3 112 aaKnown RBP16.24■□□□□ 0.19
PTCD3-203ENST00000409783 PHYHIPLQ96FC7 376 aa16.24■□□□□ 0.19
PTCD3-203ENST00000409783 X6R8D5 127 aa16.24■□□□□ 0.19
PTCD3-203ENST00000409783 A0A1B0GVG6 124 aa16.23■□□□□ 0.19
PTCD3-203ENST00000409783 A0A1W2PPV4 95 aa16.23■□□□□ 0.19
PTCD3-203ENST00000409783 ZNF705EA8MWA4 302 aaPredicted RBP16.23■□□□□ 0.19
PTCD3-203ENST00000409783 MBP02144 154 aa16.23■□□□□ 0.19
PTCD3-203ENST00000409783 CDC34P49427 236 aaPredicted RBP16.23■□□□□ 0.19
PTCD3-203ENST00000409783 EXOC3-AS1Q8N2X6 119 aa16.23■□□□□ 0.19
PTCD3-203ENST00000409783 A0A0J9YWU9 116 aa16.22■□□□□ 0.19
PTCD3-203ENST00000409783 UBE2L3P68036 154 aaKnown RBP16.22■□□□□ 0.19
PTCD3-203ENST00000409783 PQLC2Q6ZP29 291 aa16.22■□□□□ 0.19
PTCD3-203ENST00000409783 RAB24Q969Q5 203 aa16.22■□□□□ 0.19
PTCD3-203ENST00000409783 PRELID1Q9Y255 219 aa16.22■□□□□ 0.19
PTCD3-203ENST00000409783 HMGB3O15347 200 aaKnown RBP16.21■□□□□ 0.19
PTCD3-203ENST00000409783 BCL2L11O43521 198 aa16.21■□□□□ 0.19
PTCD3-203ENST00000409783 STAG3L2P0CL84 134 aa16.21■□□□□ 0.19
PTCD3-203ENST00000409783 STAG3L3P0CL85 134 aa16.21■□□□□ 0.19
PTCD3-203ENST00000409783 ICAM4Q14773 271 aa16.21■□□□□ 0.19
PTCD3-203ENST00000409783 SSX7Q7RTT5 188 aa16.21■□□□□ 0.19
PTCD3-203ENST00000409783 CRXO43186 299 aaPredicted RBP16.2■□□□□ 0.18
PTCD3-203ENST00000409783 C1QBP02746 253 aa16.2■□□□□ 0.18
PTCD3-203ENST00000409783 ZNF705AQ6ZN79 300 aaPredicted RBP16.2■□□□□ 0.18
PTCD3-203ENST00000409783 Q8NAQ8 132 aa16.2■□□□□ 0.18
PTCD3-203ENST00000409783 MUC7Q8TAX7 377 aa16.2■□□□□ 0.18
PTCD3-203ENST00000409783 NPIPB6E9PJ23 425 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 BOLA2-SMG1P6H3BVE0 249 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 M0R2Z0 102 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 CD300CQ08708 224 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 ZNF726P1Q15940 193 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 SPINK13Q1W4C9 94 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 LGALSLQ3ZCW2 172 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-203ENST00000409783 TMUB2Q71RG4 321 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 AKAP14Q86UN6 197 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 C1orf158Q8N1D5 194 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 LYPD1Q8N2G4 141 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 AAMDCQ9H7C9 122 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 PLA2G2EQ9NZK7 142 aa16.19■□□□□ 0.18
PTCD3-203ENST00000409783 ARL14EPLP0DKL9 152 aa16.18■□□□□ 0.18
PTCD3-203ENST00000409783 RANP62826 216 aaKnown RBP16.18■□□□□ 0.18
PTCD3-203ENST00000409783 OR10J6PQ8NGY7 276 aa16.18■□□□□ 0.18
PTCD3-203ENST00000409783 SUN5Q8TC36 379 aa16.18■□□□□ 0.18
PTCD3-203ENST00000409783 IGF2BP2-AS1Q96M15 143 aa16.18■□□□□ 0.18
PTCD3-203ENST00000409783 ACTR3CQ9C0K3 210 aaPredicted RBP16.18■□□□□ 0.18
PTCD3-203ENST00000409783 Q9H3A6 140 aa16.18■□□□□ 0.18
PTCD3-203ENST00000409783 C11orf68Q9H3H3 251 aaKnown RBP16.18■□□□□ 0.18
PTCD3-203ENST00000409783 KANTRA0A1W2PQU2 76 aa16.17■□□□□ 0.18
PTCD3-203ENST00000409783 AMBPP02760 352 aa16.17■□□□□ 0.18
PTCD3-203ENST00000409783 ZNF471Q9BX82 626 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-203ENST00000409783 RBMY1A1P0DJD3 496 aaKnown RBP16.16■□□□□ 0.18
PTCD3-203ENST00000409783 RBMY1CP0DJD4 496 aa16.16■□□□□ 0.18
PTCD3-203ENST00000409783 CT45A10P0DMU9 189 aa16.16■□□□□ 0.18
PTCD3-203ENST00000409783 MIFP14174 115 aa16.16■□□□□ 0.18
PTCD3-203ENST00000409783 RBMY1FQ15415 496 aaKnown RBP16.16■□□□□ 0.18
PTCD3-203ENST00000409783 NEU1Q99519 415 aa16.16■□□□□ 0.18
PTCD3-203ENST00000409783 CSMD3Q7Z407 3707 aa16.16■□□□□ 0.18
PTCD3-203ENST00000409783 IGHV4-28A0A0C4DH34 117 aa16.15■□□□□ 0.18
PTCD3-203ENST00000409783 C3orf84H3BNL1 204 aa16.15■□□□□ 0.18
PTCD3-203ENST00000409783 DEFB4AO15263 64 aa16.15■□□□□ 0.18
PTCD3-203ENST00000409783 AKR1C8PQ5T2L2 129 aa16.15■□□□□ 0.18
PTCD3-203ENST00000409783 BAP18Q8IXM2 172 aa16.15■□□□□ 0.18
PTCD3-203ENST00000409783 TRAV12-2A0A075B6T6 113 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 CTXND1A0A1B0GTU2 59 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 SEC11BP0C7V7 166 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 GCHFRP30047 84 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 ERCC8Q13216 396 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 IL17DQ8TAD2 202 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 HYLS1Q96M11 299 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 ODF3Q96PU9 254 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 AGPAT4-IT1Q9H0P7 198 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 STARD9Q9P2P6 4700 aa16.14■□□□□ 0.17
PTCD3-203ENST00000409783 IGKV2-40A0A087WW87 121 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-203ENST00000409783 PFDN1O60925 122 aa16.13■□□□□ 0.17
PTCD3-203ENST00000409783 IGKV2D-40P01614 121 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-203ENST00000409783 CDKN1BP46527 198 aa16.13■□□□□ 0.17
PTCD3-203ENST00000409783 KIR3DS1Q14943 382 aa16.13■□□□□ 0.17
PTCD3-203ENST00000409783 C9orf47Q6ZRZ4 202 aa16.13■□□□□ 0.17
PTCD3-203ENST00000409783 FAM19A4Q96LR4 140 aa16.13■□□□□ 0.17
PTCD3-203ENST00000409783 OTORQ9NRC9 128 aa16.13■□□□□ 0.17
PTCD3-203ENST00000409783 PPP1R14DQ9NXH3 145 aa16.13■□□□□ 0.17
PTCD3-203ENST00000409783 IGHV3OR16-12A0A075B7B8 117 aa16.12■□□□□ 0.17
PTCD3-203ENST00000409783 CXorf1O96002 111 aa16.12■□□□□ 0.17
PTCD3-203ENST00000409783 INSP01308 110 aa16.12■□□□□ 0.17
PTCD3-203ENST00000409783 STOML3Q8TAV4 291 aa16.12■□□□□ 0.17
PTCD3-203ENST00000409783 VGLL1Q99990 258 aa16.12■□□□□ 0.17
PTCD3-203ENST00000409783 GOLT1BQ9Y3E0 138 aa16.12■□□□□ 0.17
PTCD3-203ENST00000409783 CASC10Q5T4H9 136 aa16.11■□□□□ 0.17
PTCD3-203ENST00000409783 LINC00477Q96M19 166 aa16.11■□□□□ 0.17
PTCD3-203ENST00000409783 PGPA6NDG6 321 aa16.1■□□□□ 0.17
PTCD3-203ENST00000409783 SMIM9A6NGZ8 99 aa16.1■□□□□ 0.17
PTCD3-203ENST00000409783 FHITP49789 147 aa16.1■□□□□ 0.17
PTCD3-203ENST00000409783 EIF5AP63241 154 aaKnown RBP16.1■□□□□ 0.17
PTCD3-203ENST00000409783 TMEM167BQ9NRX6 74 aa16.1■□□□□ 0.17
PTCD3-203ENST00000409783 RBAKDNA6NC62 111 aa16.09■□□□□ 0.17
PTCD3-203ENST00000409783 DIRC3C9JPN6 131 aa16.09■□□□□ 0.17
PTCD3-203ENST00000409783 TPT1P13693 172 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms