RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SULT1A1P50225 295 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 S100A10P60903 97 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 VWC2Q2TAL6 325 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 C1orf134Q5TEV5 83 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 ODF3Q96PU9 254 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 NACAE9PAV3 2078 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 FAM24AA6NFZ4 105 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 ZNF253O75346 499 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 NUDT3O95989 172 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 RPL29P47914 159 aaKnown RBP10.36□□□□□ -0.75
CBX3-203ENST00000409747 BAXQ07812 192 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 FCN2Q15485 313 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 MORN5Q5VZ52 161 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 MIC13Q5XKP0 118 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
CBX3-203ENST00000409747 NOP10Q9NPE3 64 aaKnown RBP10.36□□□□□ -0.75
CBX3-203ENST00000409747 PKD1P98161 4303 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 H3BQ15 152 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 H3BTX0 84 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 LEPP41159 167 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 CCL18P55774 89 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 SLC39A9Q9NUM3 307 aa10.36□□□□□ -0.75
CBX3-203ENST00000409747 FAM240BA0A1B0GVZ2 78 aa10.35□□□□□ -0.75
CBX3-203ENST00000409747 PRB4P10163 310 aaPredicted RBP10.35□□□□□ -0.75
CBX3-203ENST00000409747 ATP6V1FQ16864 119 aa10.35□□□□□ -0.75
CBX3-203ENST00000409747 MZT2BQ6NZ67 158 aa10.35□□□□□ -0.75
CBX3-203ENST00000409747 CHAC2Q8WUX2 184 aa10.35□□□□□ -0.75
CBX3-203ENST00000409747 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
CBX3-203ENST00000409747 PRAC2D3DTV9 90 aa10.34□□□□□ -0.75
CBX3-203ENST00000409747 NPIPB6E9PJ23 425 aa10.34□□□□□ -0.75
CBX3-203ENST00000409747 MPDU1O75352 247 aa10.34□□□□□ -0.75
CBX3-203ENST00000409747 LINC00299Q6ZSB3 139 aa10.34□□□□□ -0.75
CBX3-203ENST00000409747 TMEM252Q8N6L7 170 aa10.34□□□□□ -0.75
CBX3-203ENST00000409747 MRPL53Q96EL3 112 aaKnown RBP10.34□□□□□ -0.75
CBX3-203ENST00000409747 KRTAP17-1Q9BYP8 105 aa10.34□□□□□ -0.75
CBX3-203ENST00000409747 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 RLN2P04090 185 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 FGF7P21781 194 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 RAB32Q13637 225 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 CLINT1Q14677 625 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 IGSF23A1L1A6 192 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 CT45A10P0DMU9 189 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 IL15RAQ13261 267 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 PDE6HQ13956 83 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 RNF141Q8WVD5 230 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 PYGO2Q9BRQ0 406 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 PARD6GQ9BYG4 376 aaPredicted RBP10.33□□□□□ -0.76
CBX3-203ENST00000409747 GPN1Q9HCN4 374 aaPredicted RBP10.33□□□□□ -0.76
CBX3-203ENST00000409747 ZNF586Q9NXT0 402 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 PRELID1Q9Y255 219 aa10.33□□□□□ -0.76
CBX3-203ENST00000409747 DNAH11Q96DT5 4516 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 DYNC1H1Q14204 4646 aaKnown RBP10.32□□□□□ -0.76
CBX3-203ENST00000409747 TRBV19A0A075B6N1 114 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 NBDYA0A0U1RRE5 68 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 KIR3DS1Q14943 382 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 LINC00612Q8N6U2 182 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 ZNRF2Q8NHG8 242 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 S100ZQ8WXG8 99 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 ZNF503Q96F45 646 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 PCLOQ9Y6V0 5065 aa10.32□□□□□ -0.76
CBX3-203ENST00000409747 TRAV12-3A0A0B4J271 114 aa10.31□□□□□ -0.76
CBX3-203ENST00000409747 J3KRW8 73 aa10.31□□□□□ -0.76
CBX3-203ENST00000409747 SLC25A5P05141 298 aaKnown RBP10.31□□□□□ -0.76
CBX3-203ENST00000409747 HIST1H1EP10412 219 aaKnown RBP10.31□□□□□ -0.76
CBX3-203ENST00000409747 M6PRP20645 277 aa10.31□□□□□ -0.76
CBX3-203ENST00000409747 GNPNAT1Q96EK6 184 aaPredicted RBP10.31□□□□□ -0.76
CBX3-203ENST00000409747 TIMM9Q9Y5J7 89 aa10.31□□□□□ -0.76
CBX3-203ENST00000409747 ASAH1Q13510 395 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 OR5I1Q13606 314 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 ZNF680Q8NEM1 530 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 NPCDR1Q9BY65 106 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 AAMDCQ9H7C9 122 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 LINC00588Q9Y4M8 146 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 GAGE7O76087 117 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 ENKURQ8TC29 256 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 RXFP4Q8TDU9 374 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 SLC25A31Q9H0C2 315 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 KCNIP2Q9NS61 270 aa10.3□□□□□ -0.76
CBX3-203ENST00000409747 C7orf71A4D174 169 aa10.29□□□□□ -0.76
CBX3-203ENST00000409747 H3BNG1 76 aa10.29□□□□□ -0.76
CBX3-203ENST00000409747 DAZ2Q13117 558 aaKnown RBP10.29□□□□□ -0.76
CBX3-203ENST00000409747 SSX7Q7RTT5 188 aa10.29□□□□□ -0.76
CBX3-203ENST00000409747 E5RGE8 158 aa10.28□□□□□ -0.76
CBX3-203ENST00000409747 M0R3E3 92 aa10.28□□□□□ -0.76
CBX3-203ENST00000409747 KLLNB2CW77 178 aa10.27□□□□□ -0.76
CBX3-203ENST00000409747 NDUFB4O95168 129 aa10.27□□□□□ -0.76
CBX3-203ENST00000409747 PYYP10082 97 aa10.27□□□□□ -0.76
CBX3-203ENST00000409747 TTC32Q5I0X7 151 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms