RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PRELID1Q9Y255 219 aa14.42□□□□□ -0.1
PDLIM2-207ENST00000409417 A0A0D9SG52 128 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 PRAC2D3DTV9 90 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 C3orf84H3BNL1 204 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 FAM122CQ6P4D5 195 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 PQLC2Q6ZP29 291 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 TCTE3Q8IZS6 198 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 OR10J6PQ8NGY7 276 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 ARPC5LQ9BPX5 153 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 AAMDCQ9H7C9 122 aa14.41□□□□□ -0.1
PDLIM2-207ENST00000409417 AMBPP02760 352 aa14.4□□□□□ -0.1
PDLIM2-207ENST00000409417 PRB4P10163 310 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-207ENST00000409417 EXOC3-AS1Q8N2X6 119 aa14.4□□□□□ -0.1
PDLIM2-207ENST00000409417 X6R8D5 127 aa14.4□□□□□ -0.1
PDLIM2-207ENST00000409417 M0R3E3 92 aa14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 EIF3GO75821 320 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 CDC34P49427 236 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 ZNF705AQ6ZN79 300 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 LYPD1Q8N2G4 141 aa14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 IL17DQ8TAD2 202 aa14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 C11orf68Q9H3H3 251 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 PPP1R14DQ9NXH3 145 aa14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 DNAH7Q8WXX0 4024 aa14.39□□□□□ -0.11
PDLIM2-207ENST00000409417 BOLA2-SMG1P6H3BVE0 249 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 MIFP14174 115 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 ICAM4Q14773 271 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 Q8NAQ8 132 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 RAB24Q969Q5 203 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 PHYHIPLQ96FC7 376 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 hCG_2014768A0A024R1R8 64 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 M0R2Z0 102 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 RANP62826 216 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 SPINK13Q1W4C9 94 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 IGF2BP2-AS1Q96M15 143 aa14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 ACTR3CQ9C0K3 210 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-207ENST00000409417 HMGB3O15347 200 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-207ENST00000409417 BCL2L11O43521 198 aa14.37□□□□□ -0.11
PDLIM2-207ENST00000409417 STAG3L2P0CL84 134 aa14.37□□□□□ -0.11
PDLIM2-207ENST00000409417 STAG3L3P0CL85 134 aa14.37□□□□□ -0.11
PDLIM2-207ENST00000409417 NEU1Q99519 415 aa14.37□□□□□ -0.11
PDLIM2-207ENST00000409417 IGHV4-28A0A0C4DH34 117 aa14.36□□□□□ -0.11
PDLIM2-207ENST00000409417 KANTRA0A1W2PQU2 76 aa14.36□□□□□ -0.11
PDLIM2-207ENST00000409417 NPIPB6E9PJ23 425 aa14.36□□□□□ -0.11
PDLIM2-207ENST00000409417 CRXO43186 299 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-207ENST00000409417 ARL14EPLP0DKL9 152 aa14.36□□□□□ -0.11
PDLIM2-207ENST00000409417 AKAP14Q86UN6 197 aa14.36□□□□□ -0.11
PDLIM2-207ENST00000409417 GOLT1BQ9Y3E0 138 aa14.36□□□□□ -0.11
PDLIM2-207ENST00000409417 DEFB4AO15263 64 aa14.35□□□□□ -0.11
PDLIM2-207ENST00000409417 INSP01308 110 aa14.35□□□□□ -0.11
PDLIM2-207ENST00000409417 AKR1C8PQ5T2L2 129 aa14.35□□□□□ -0.11
PDLIM2-207ENST00000409417 CASC10Q5T4H9 136 aa14.35□□□□□ -0.11
PDLIM2-207ENST00000409417 TMUB2Q71RG4 321 aa14.35□□□□□ -0.11
PDLIM2-207ENST00000409417 C1orf158Q8N1D5 194 aa14.35□□□□□ -0.11
PDLIM2-207ENST00000409417 Q9H3A6 140 aa14.35□□□□□ -0.11
PDLIM2-207ENST00000409417 IGHV3OR16-12A0A075B7B8 117 aa14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 SMIM9A6NGZ8 99 aa14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 RBMY1A1P0DJD3 496 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 RBMY1CP0DJD4 496 aa14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 TSPOP30536 169 aa14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 CDKN1BP46527 198 aa14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 RBMY1FQ15415 496 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 BAP18Q8IXM2 172 aa14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 ODF3Q96PU9 254 aa14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 ZNF471Q9BX82 626 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-207ENST00000409417 TRAV12-2A0A075B6T6 113 aa14.33□□□□□ -0.12
PDLIM2-207ENST00000409417 PFDN1O60925 122 aa14.33□□□□□ -0.12
PDLIM2-207ENST00000409417 C1QBP02746 253 aa14.33□□□□□ -0.12
PDLIM2-207ENST00000409417 CT45A10P0DMU9 189 aa14.33□□□□□ -0.12
PDLIM2-207ENST00000409417 CSN1S1P47710 185 aa14.33□□□□□ -0.12
PDLIM2-207ENST00000409417 LINC00477Q96M19 166 aa14.33□□□□□ -0.12
PDLIM2-207ENST00000409417 OTORQ9NRC9 128 aa14.33□□□□□ -0.12
PDLIM2-207ENST00000409417 CXorf1O96002 111 aa14.32□□□□□ -0.12
PDLIM2-207ENST00000409417 GCHFRP30047 84 aa14.32□□□□□ -0.12
PDLIM2-207ENST00000409417 EIF5AP63241 154 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-207ENST00000409417 SUN5Q8TC36 379 aa14.32□□□□□ -0.12
PDLIM2-207ENST00000409417 RXFP4Q8TDU9 374 aa14.32□□□□□ -0.12
PDLIM2-207ENST00000409417 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
PDLIM2-207ENST00000409417 CTXND1A0A1B0GTU2 59 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 SEC11BP0C7V7 166 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 ERCC8Q13216 396 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 ZNF726P1Q15940 193 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 ZFAND6Q6FIF0 208 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 C9orf47Q6ZRZ4 202 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 SSX7Q7RTT5 188 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 HYLS1Q96M11 299 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 TMEM208Q9BTX3 173 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 IGKV2-40A0A087WW87 121 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 IGKV2D-40P01614 121 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 LGALSLQ3ZCW2 172 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 FAM74A1Q5RGS3 127 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 VGLL1Q99990 258 aa14.31□□□□□ -0.12
PDLIM2-207ENST00000409417 CSMD3Q7Z407 3707 aa14.3□□□□□ -0.12
PDLIM2-207ENST00000409417 A0A1B0GVG6 124 aa14.3□□□□□ -0.12
PDLIM2-207ENST00000409417 PGPA6NDG6 321 aa14.3□□□□□ -0.12
PDLIM2-207ENST00000409417 HBE1P02100 147 aa14.3□□□□□ -0.12
PDLIM2-207ENST00000409417 LEPP41159 167 aa14.3□□□□□ -0.12
PDLIM2-207ENST00000409417 C11orf45Q8TAV5 145 aa14.3□□□□□ -0.12
PDLIM2-207ENST00000409417 TMEM167BQ9NRX6 74 aa14.3□□□□□ -0.12
PDLIM2-207ENST00000409417 TENM2Q9NT68 2774 aa14.29□□□□□ -0.12
PDLIM2-207ENST00000409417 RBAKDNA6NC62 111 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms