RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
ATG4B-203ENST00000400772 GUK1Q16774 197 aa11.25□□□□□ -0.61
ATG4B-203ENST00000400772 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
ATG4B-203ENST00000400772 NDUFAF3Q9BU61 184 aa11.25□□□□□ -0.61
ATG4B-203ENST00000400772 SLC25A31Q9H0C2 315 aa11.25□□□□□ -0.61
ATG4B-203ENST00000400772 PPP1R14DQ9NXH3 145 aa11.25□□□□□ -0.61
ATG4B-203ENST00000400772 DNAH2Q9P225 4427 aa11.24□□□□□ -0.61
ATG4B-203ENST00000400772 TSPOP30536 169 aa11.24□□□□□ -0.61
ATG4B-203ENST00000400772 CDKN1BP46527 198 aa11.24□□□□□ -0.61
ATG4B-203ENST00000400772 PPP1R1CQ8WVI7 109 aa11.24□□□□□ -0.61
ATG4B-203ENST00000400772 LINC01587Q99440 93 aa11.24□□□□□ -0.61
ATG4B-203ENST00000400772 PARD6GQ9BYG4 376 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-203ENST00000400772 BATF3Q9NR55 127 aa11.24□□□□□ -0.61
ATG4B-203ENST00000400772 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
ATG4B-203ENST00000400772 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 ZNF253O75346 499 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 NDUFB4O95168 129 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 TAS2R60P59551 318 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 DEFA1P59665 94 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 DEFA3P59666 94 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 CLINT1Q14677 625 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 FCN2Q15485 313 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 SLC25A2Q9BXI2 301 aa11.23□□□□□ -0.61
ATG4B-203ENST00000400772 WDR61Q9GZS3 305 aaKnown RBP11.23□□□□□ -0.61
ATG4B-203ENST00000400772 CT45A10P0DMU9 189 aa11.22□□□□□ -0.61
ATG4B-203ENST00000400772 PYYP10082 97 aa11.22□□□□□ -0.61
ATG4B-203ENST00000400772 HTN3P15516 51 aa11.22□□□□□ -0.61
ATG4B-203ENST00000400772 DAD1P61803 113 aa11.22□□□□□ -0.61
ATG4B-203ENST00000400772 OR10J6PQ8NGY7 276 aa11.22□□□□□ -0.61
ATG4B-203ENST00000400772 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
ATG4B-203ENST00000400772 FAM167A-AS1Q96KT0 104 aa11.22□□□□□ -0.61
ATG4B-203ENST00000400772 LYRM9A8MSI8 78 aa11.21□□□□□ -0.61
ATG4B-203ENST00000400772 SSNA1O43805 119 aa11.21□□□□□ -0.61
ATG4B-203ENST00000400772 MPC2O95563 127 aa11.21□□□□□ -0.61
ATG4B-203ENST00000400772 HIST1H1EP10412 219 aaKnown RBP11.21□□□□□ -0.61
ATG4B-203ENST00000400772 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.61
ATG4B-203ENST00000400772 DNAH17Q9UFH2 4485 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 FAT2Q9NYQ8 4349 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 M0R3E3 92 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 P0DMU3 169 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 HTN1P15515 57 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 GFI1BQ5VTD9 330 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 MIR17HGQ75NE6 70 aa11.2□□□□□ -0.62
ATG4B-203ENST00000400772 MRPL53Q96EL3 112 aaKnown RBP11.2□□□□□ -0.62
ATG4B-203ENST00000400772 H7BYZ3 331 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 DEFB130BP0DP73 79 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 DEFB130AP0DP74 79 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 ERCC8Q13216 396 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 PDE6HQ13956 83 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 TMEM88Q6PEY1 159 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
ATG4B-203ENST00000400772 BLNKQ8WV28 456 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 C16orf74Q96GX8 76 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 ODF3Q96PU9 254 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 ATP5SQ99766 215 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 HSPB11Q9Y547 144 aa11.19□□□□□ -0.62
ATG4B-203ENST00000400772 TIMM9Q9Y5J7 89 aa11.18□□□□□ -0.62
ATG4B-203ENST00000400772 J3KRW8 73 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 RPL12P30050 165 aaKnown RBP11.17□□□□□ -0.62
ATG4B-203ENST00000400772 LEPP41159 167 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 ZNF493Q6ZR52 646 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
ATG4B-203ENST00000400772 FXYD5Q96DB9 178 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 FAM19A4Q96LR4 140 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 OR51M1Q9H341 326 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 WFDC1Q9HC57 220 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 MBD2Q9UBB5 411 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 PRELID1Q9Y255 219 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 TIMM8BQ9Y5J9 83 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-203ENST00000400772 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
ATG4B-203ENST00000400772 NBEAP1P0C6P0 100 aa11.16□□□□□ -0.62
ATG4B-203ENST00000400772 ZNF503Q96F45 646 aa11.16□□□□□ -0.62
ATG4B-203ENST00000400772 MRPL32Q9BYC8 188 aaKnown RBP11.16□□□□□ -0.62
ATG4B-203ENST00000400772 SMIM3Q9BZL3 60 aa11.16□□□□□ -0.62
ATG4B-203ENST00000400772 NOP10Q9NPE3 64 aaKnown RBP11.16□□□□□ -0.62
ATG4B-203ENST00000400772 FUT9Q9Y231 359 aa11.16□□□□□ -0.62
ATG4B-203ENST00000400772 ALG5Q9Y673 324 aa11.16□□□□□ -0.62
ATG4B-203ENST00000400772 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 CBY3A6NI87 242 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 OR10J4P0C629 311 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 PET100P0DJ07 73 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 ICAM4Q14773 271 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 PAXXQ9BUH6 204 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 KCNIP2Q9NS61 270 aa11.15□□□□□ -0.62
ATG4B-203ENST00000400772 KLLNB2CW77 178 aa11.14□□□□□ -0.63
ATG4B-203ENST00000400772 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
ATG4B-203ENST00000400772 LINC00612Q8N6U2 182 aa11.14□□□□□ -0.63
ATG4B-203ENST00000400772 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
ATG4B-203ENST00000400772 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
ATG4B-203ENST00000400772 VGLL1Q99990 258 aa11.14□□□□□ -0.63
ATG4B-203ENST00000400772 AAMDCQ9H7C9 122 aa11.14□□□□□ -0.63
ATG4B-203ENST00000400772 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms