RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 GFRA4Q9GZZ7 299 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 NPIPB6E9PJ23 425 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 CT45A10P0DMU9 189 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 CCL8P80075 99 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 RALYQ9UKM9 306 aaKnown RBP13.56□□□□□ -0.24
PTPRA-205ENST00000399903 S4R3C0 116 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 APOBEC3AP31941 199 aaPredicted RBP13.56□□□□□ -0.24
PTPRA-205ENST00000399903 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.56□□□□□ -0.24
PTPRA-205ENST00000399903 TWIST1Q15672 202 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 LGALS9BQ3B8N2 356 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 LGALS9CQ6DKI2 356 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 ORMDL3Q8N138 153 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 C8orf49Q96NF6 230 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 TMEM160Q9NX00 188 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 HIGD1AQ9Y241 93 aa13.56□□□□□ -0.24
PTPRA-205ENST00000399903 NDUFS8O00217 210 aa13.55□□□□□ -0.24
PTPRA-205ENST00000399903 EVI2AP22794 236 aa13.55□□□□□ -0.24
PTPRA-205ENST00000399903 C1orf162Q8NEQ5 155 aaPredicted RBP13.55□□□□□ -0.24
PTPRA-205ENST00000399903 ZNF479Q96JC4 524 aa13.55□□□□□ -0.24
PTPRA-205ENST00000399903 SPAG8Q99932 426 aaPredicted RBP13.55□□□□□ -0.24
PTPRA-205ENST00000399903 RAB9BQ9NP90 201 aa13.55□□□□□ -0.24
PTPRA-205ENST00000399903 A0A1W2PPI3 338 aa13.55□□□□□ -0.24
PTPRA-205ENST00000399903 CRYBA4P53673 196 aa13.55□□□□□ -0.24
PTPRA-205ENST00000399903 POU2AF1Q16633 256 aa13.55□□□□□ -0.24
PTPRA-205ENST00000399903 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
PTPRA-205ENST00000399903 A0A1B0GWB2 263 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 NDUFS7O75251 213 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 FSTL3O95633 263 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 MZT1Q08AG7 82 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 SCNM1Q9BWG6 230 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 RITA1Q96K30 269 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 NPYP01303 97 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 GP9P14770 177 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 FOXC2Q99958 501 aa13.54□□□□□ -0.24
PTPRA-205ENST00000399903 DLX1P56177 255 aa13.53□□□□□ -0.24
PTPRA-205ENST00000399903 OSR1Q8TAX0 266 aaPredicted RBP13.53□□□□□ -0.24
PTPRA-205ENST00000399903 PSG8Q9UQ74 426 aa13.53□□□□□ -0.24
PTPRA-205ENST00000399903 A0A0G2JNJ9 132 aa13.52□□□□□ -0.24
PTPRA-205ENST00000399903 CGB1A6NKQ9 187 aa13.52□□□□□ -0.24
PTPRA-205ENST00000399903 MRPL51Q4U2R6 128 aaKnown RBP13.52□□□□□ -0.24
PTPRA-205ENST00000399903 MBNL2Q5VZF2 373 aaKnown RBP13.52□□□□□ -0.24
PTPRA-205ENST00000399903 SPANXB1Q9NS25 103 aaPredicted RBP13.52□□□□□ -0.24
PTPRA-205ENST00000399903 Q9UFV3 132 aa13.52□□□□□ -0.24
PTPRA-205ENST00000399903 TMEM189A5PLL7 270 aa13.52□□□□□ -0.25
PTPRA-205ENST00000399903 CGB3P0DN86 165 aa13.52□□□□□ -0.25
PTPRA-205ENST00000399903 CGB7P0DN87 165 aa13.52□□□□□ -0.25
PTPRA-205ENST00000399903 LEPP41159 167 aa13.52□□□□□ -0.25
PTPRA-205ENST00000399903 ZC2HC1BQ5TFG8 222 aa13.52□□□□□ -0.25
PTPRA-205ENST00000399903 IGFL3Q6UXB1 125 aa13.52□□□□□ -0.25
PTPRA-205ENST00000399903 GEMIN7Q9H840 131 aaKnown RBP13.52□□□□□ -0.25
PTPRA-205ENST00000399903 ATP5IP56385 69 aaPredicted RBP13.51□□□□□ -0.25
PTPRA-205ENST00000399903 GFRALQ6UXV0 394 aa13.51□□□□□ -0.25
PTPRA-205ENST00000399903 C20orf78Q9BR46 151 aa13.51□□□□□ -0.25
PTPRA-205ENST00000399903 OR4C13Q8NGP0 309 aa13.51□□□□□ -0.25
PTPRA-205ENST00000399903 HIST1H4GQ99525 98 aa13.51□□□□□ -0.25
PTPRA-205ENST00000399903 OTORQ9NRC9 128 aa13.51□□□□□ -0.25
PTPRA-205ENST00000399903 TRBV25-1A0A075B6N4 114 aa13.51□□□□□ -0.25
PTPRA-205ENST00000399903 TNFAIP6P98066 277 aaPredicted RBP13.51□□□□□ -0.25
PTPRA-205ENST00000399903 RNF7Q9UBF6 113 aa13.51□□□□□ -0.25
PTPRA-205ENST00000399903 MAP1AP78559 2803 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-205ENST00000399903 GAGE13Q4V321 117 aa13.5□□□□□ -0.25
PTPRA-205ENST00000399903 TMEM133Q9H2Q1 129 aa13.5□□□□□ -0.25
PTPRA-205ENST00000399903 SLC25A39Q9BZJ4 359 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-205ENST00000399903 CD40P25942 277 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 CRIP1P50238 77 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 C8orf46Q8TAG6 207 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 GAS8-AS1O95177 125 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 IGLV2-11P01706 119 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 CNTFRP26992 372 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 GLRXP35754 106 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 FAM104BQ5XKR9 115 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 Q8NA96 180 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 PRRG2O14669 202 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 NBL1P41271 181 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 VMA21Q3ZAQ7 101 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 THAP8Q8NA92 274 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 MSRB1Q9NZV6 116 aa13.49□□□□□ -0.25
PTPRA-205ENST00000399903 SIVA1O15304 175 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 CR1LQ2VPA4 569 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 IGF2-ASQ6U949 168 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 GAFA1Q96PS6 74 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 ZNF785A8K8V0 405 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 IGLL5B9A064 214 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 TGFAP01135 160 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 IGHV1-46P01743 117 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 IGFL4Q6B9Z1 124 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 RASL11BQ9BPW5 248 aa13.48□□□□□ -0.25
PTPRA-205ENST00000399903 TRAV40A0A0B4J280 105 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 GATA1P15976 413 aaPredicted RBP13.47□□□□□ -0.25
PTPRA-205ENST00000399903 PLGLAQ15195 96 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 Q8TAT8 98 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 ZNF418Q8TF45 676 aaPredicted RBP13.47□□□□□ -0.25
PTPRA-205ENST00000399903 APOMO95445 188 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 TMEM75Q8N9X5 138 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 RPL27AP46776 148 aaKnown RBP13.47□□□□□ -0.25
PTPRA-205ENST00000399903 BSPH1Q075Z2 132 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 FOXI2Q6ZQN5 318 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 SYT8Q8NBV8 401 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 TMEM167AQ8TBQ9 72 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms