RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
MSL3-207ENST00000398527 PXMP4Q9Y6I8 212 aa8.62□□□□□ -1.03
MSL3-207ENST00000398527 SPINT2O43291 252 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 COX5AP20674 150 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 PFN2P35080 140 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 Q6ZRM9 215 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 DRAM1Q8N682 238 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 OR51H1Q8NH63 302 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
MSL3-207ENST00000398527 TRAV5A0A0B4J249 113 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 TRAV17A0A0B4J275 112 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 HSPB6O14558 160 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 SNCGO76070 127 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 BCL2P10415 239 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 COX6B1P14854 86 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 OPRK1P41145 380 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 CX3CL1P78423 397 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 KIR3DS1Q14943 382 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 FDCSPQ8NFU4 85 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 OR10G8Q8NGN5 311 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 OR2T10Q8NGZ9 312 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 AGMATQ9BSE5 352 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 LY6LH3BQJ8 138 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 WISP2O76076 250 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 IGKV3-15P01624 115 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 LGALS1P09382 135 aaKnown RBP8.6□□□□□ -1.03
MSL3-207ENST00000398527 CECR9P0C854 216 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 IGHV1-2P23083 117 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 CXXC4Q9H2H0 198 aa8.6□□□□□ -1.03
MSL3-207ENST00000398527 MOB3BQ86TA1 216 aa8.59□□□□□ -1.03
MSL3-207ENST00000398527 OR11H6Q8NGC7 330 aa8.59□□□□□ -1.03
MSL3-207ENST00000398527 FAM103A1Q9BTL3 118 aaKnown RBP8.59□□□□□ -1.03
MSL3-207ENST00000398527 KCNIP2Q9NS61 270 aa8.59□□□□□ -1.03
MSL3-207ENST00000398527 ARID1AO14497 2285 aa8.59□□□□□ -1.03
MSL3-207ENST00000398527 OR9G9P0C7N8 305 aa8.59□□□□□ -1.03
MSL3-207ENST00000398527 ZNF672Q499Z4 452 aaPredicted RBP8.59□□□□□ -1.03
MSL3-207ENST00000398527 FAM90A2PQ658T7 463 aa8.59□□□□□ -1.03
MSL3-207ENST00000398527 SLC25A48Q6ZT89 311 aaKnown RBP8.59□□□□□ -1.03
MSL3-207ENST00000398527 TPRX1Q8N7U7 411 aa8.59□□□□□ -1.03
MSL3-207ENST00000398527 MED12LQ86YW9 2145 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 OVOL1O14753 267 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 CLDN14O95500 239 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 KRTAP10-9P60411 292 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 SPRNQ5BIV9 151 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 IL1F10Q8WWZ1 152 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 TAF15Q92804 592 aaKnown RBP eCLIP8.58□□□□□ -1.04
MSL3-207ENST00000398527 GPHA2Q96T91 129 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 SDF2L1Q9HCN8 221 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 ZNF331Q9NQX6 463 aaPredicted RBP8.58□□□□□ -1.04
MSL3-207ENST00000398527 PKDREJQ9NTG1 2253 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 A0A0U1RQV1 116 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
MSL3-207ENST00000398527 SPRY3O43610 288 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 IGLV1-44P01699 117 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 APOHP02749 345 aaPredicted RBP8.58□□□□□ -1.04
MSL3-207ENST00000398527 CA7P43166 264 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 PSMB3P49720 205 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 ARL16Q0P5N6 197 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 C11orf53Q8IXP5 236 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 DPH3Q96FX2 82 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 TMEM147Q9BVK8 224 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
MSL3-207ENST00000398527 DUSP14O95147 198 aaKnown RBP8.57□□□□□ -1.04
MSL3-207ENST00000398527 IZUMO4Q1ZYL8 232 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 ACP7Q6ZNF0 438 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 KLF14Q8TD94 323 aaPredicted RBP8.57□□□□□ -1.04
MSL3-207ENST00000398527 KLF12Q9Y4X4 402 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 PMS2P5A8MQ11 134 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 C12orf77C9JDV5 145 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 ZNHIT1O43257 154 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 DPM2O94777 84 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 PRR20EP86478 221 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 PRR20CP86479 221 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 PRR20DP86480 221 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 PRR20BP86481 221 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 PRR20AP86496 221 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 ZNF726P1Q15940 193 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 Q6ZS92 163 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 BAGE2Q86Y30 109 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 C3orf22Q8N5N4 141 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 LINC00482Q8N8I6 264 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 PMCHL2Q9BQD1 86 aa8.57□□□□□ -1.04
MSL3-207ENST00000398527 KLK5Q9Y337 293 aaPredicted RBP8.57□□□□□ -1.04
MSL3-207ENST00000398527 CTXND1A0A1B0GTU2 59 aa8.56□□□□□ -1.04
MSL3-207ENST00000398527 CRISP2P16562 243 aa8.56□□□□□ -1.04
MSL3-207ENST00000398527 DLX1P56177 255 aa8.56□□□□□ -1.04
MSL3-207ENST00000398527 SAA2-SAA4A0A096LPE2 208 aa8.55□□□□□ -1.04
MSL3-207ENST00000398527 RBP4P02753 201 aa8.55□□□□□ -1.04
MSL3-207ENST00000398527 GP9P14770 177 aa8.55□□□□□ -1.04
MSL3-207ENST00000398527 GAGE13Q4V321 117 aa8.55□□□□□ -1.04
MSL3-207ENST00000398527 ITLN2Q8WWU7 325 aaPredicted RBP8.55□□□□□ -1.04
MSL3-207ENST00000398527 PSPNO60542 156 aa8.55□□□□□ -1.04
MSL3-207ENST00000398527 FGF6P10767 208 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms