RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 HBBP68871 147 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 C21orf62-AS1Q17RA5 79 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 Q86TA4 180 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 HIST3H2BBQ8N257 126 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 TMUB1Q9BVT8 246 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 A6NDX4 124 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 IGLV1-40P01703 118 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF738Q8NE65 137 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 PIFOQ8TCI5 191 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 SIGLEC8Q9NYZ4 499 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 IL4P05112 153 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 C5orf24Q7Z6I8 188 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 CHCHD1Q96BP2 118 aaKnown RBP4.59□□□□□ -1.67
PTPRD-206ENST00000397617 CCL19Q99731 98 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 A0A1B0GUS0 222 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 LINC00614P0C842 121 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 OR10W1Q8NGF6 305 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 LEAP2Q969E1 77 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 RPP21Q9H633 154 aaKnown RBP4.59□□□□□ -1.67
PTPRD-206ENST00000397617 NAGKQ9UJ70 344 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 ORM2P19652 201 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 GRNP28799 593 aaKnown RBP4.59□□□□□ -1.67
PTPRD-206ENST00000397617 ZFAND3Q9H8U3 227 aa4.59□□□□□ -1.67
PTPRD-206ENST00000397617 PEF1Q9UBV8 284 aaKnown RBP4.59□□□□□ -1.67
PTPRD-206ENST00000397617 A0A1W2PPE3 182 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 CRXO43186 299 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-206ENST00000397617 P01737 135 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 SCGB1C2P0DMR2 95 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 GNLYP22749 145 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 PMVKQ15126 192 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 CLEC12BQ2HXU8 276 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 ZNF329Q86UD4 541 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 C20orf144Q9BQM9 153 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 SLC25A2Q9BXI2 301 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 FBXL7Q9UJT9 491 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 A8MTW9 85 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 PTTG1IPP53801 180 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 TMEM97Q5BJF2 176 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 ZNF414Q96IQ9 312 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 JMJD8Q96S16 334 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 MIEN1Q9BRT3 115 aa4.59□□□□□ -1.68
PTPRD-206ENST00000397617 MUC3AQ02505 3323 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 IGLV2-8P01709 118 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 FCER1GP30273 86 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 FGF8P55075 233 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-206ENST00000397617 C15orf32Q32M92 178 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 FAM106AQ4KMX7 169 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 C10orf55Q5SWW7 151 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 UBE2E2Q96LR5 201 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 A0A1B0GV50 99 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 ATP5G3P48201 142 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 FOXC2Q99958 501 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 DAZ1Q9NQZ3 744 aaKnown RBP4.58□□□□□ -1.68
PTPRD-206ENST00000397617 TRAV25A0A0B4J276 109 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 HNRNPA3P51991 378 aaKnown RBP4.58□□□□□ -1.68
PTPRD-206ENST00000397617 SMUG1Q53HV7 270 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 RPH3ALQ9UNE2 315 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 UNQ5815/PRO19632Q6UWF5 114 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 LINC00469Q8N7U9 141 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 Q9H3A6 140 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 RHOGP84095 191 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 FAM53AQ6NSI3 398 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-206ENST00000397617 PTH2Q96A98 100 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 HSPB8Q9UJY1 196 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 PGPA6NDG6 321 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
PTPRD-206ENST00000397617 CLEC9AQ6UXN8 241 aa4.58□□□□□ -1.68
PTPRD-206ENST00000397617 ZNF705AQ6ZN79 300 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-206ENST00000397617 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.57□□□□□ -1.68
PTPRD-206ENST00000397617 ZNF320A2RRD8 509 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 FABP5P3A8MUU1 101 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 AMBPP02760 352 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 AMY1AP04745 511 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 COX6CP09669 75 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 TRGC1P0CF51 173 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 COL8A1P27658 744 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 ADMP35318 185 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 CDKN1AP38936 164 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 TDRG1Q3Y452 100 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 VPREB3Q9UKI3 123 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 HAX1O00165 279 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 PSG3Q16557 428 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 LDLRAD2Q5SZI1 272 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 C9orf47Q6ZRZ4 202 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 HIST1H2BLQ99880 126 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 SSBP4Q9BWG4 385 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-206ENST00000397617 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 F8W735 103 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-206ENST00000397617 NPSP0C0P6 89 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 PRR25Q96S07 402 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 NRN1Q9NPD7 142 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 UFC1Q9Y3C8 167 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 TRGC2P03986 189 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 NDPQ00604 133 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 SCO2A0A1W2PP80 73 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 MED19A0JLT2 244 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-206ENST00000397617 E7EUB6 86 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 TMEM262E9PQX1 116 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 FABP4P15090 132 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 LY6DQ14210 128 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms