RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 CRIPAKQ8N1N5 446 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 TMEM75Q8N9X5 138 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 IGHV3-73A0A0B4J1V6 119 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 MORN5Q5VZ52 161 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 TRGV11A0A075B6L2 103 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 SRRM4A7MD48 611 aaKnown RBP12.15□□□□□ -0.46
CHL1-202ENST00000397491 TAL2Q16559 108 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 ERCC8Q13216 396 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 SHANK2-AS3Q9BTD1 123 aa12.15□□□□□ -0.46
CHL1-202ENST00000397491 IGHV1-3A0A0C4DH29 117 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 PI4KAP42356 2102 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 IGKV1D-17A0A075B6S4 117 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 PIMREGQ9BSJ6 248 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 TMEM14BQ9NUH8 114 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 LYNX1G3V0Z9 82 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 LYNX1P0DP58 116 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 PRADC1Q9BSG0 188 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 WNT2P09544 360 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 IGHV1-8P0DP01 117 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 PCP2Q8IVA1 136 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 SPRR3Q9UBC9 169 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 PRO1854Q9UHT4 67 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 MALP21145 153 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 ARTNQ5T4W7 220 aa12.14□□□□□ -0.47
CHL1-202ENST00000397491 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
CHL1-202ENST00000397491 FAM168AQ92567 244 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 LAMTOR3Q9UHA4 124 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 TP53TG1Q9Y2A0 90 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 NPYP01303 97 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 HEATR1Q9H583 2144 aaKnown RBP12.13□□□□□ -0.47
CHL1-202ENST00000397491 A0A087WWL8 130 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 CSRP1P21291 193 aaKnown RBP12.13□□□□□ -0.47
CHL1-202ENST00000397491 KLF5Q13887 457 aaPredicted RBP12.13□□□□□ -0.47
CHL1-202ENST00000397491 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
CHL1-202ENST00000397491 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.13□□□□□ -0.47
CHL1-202ENST00000397491 LEPROTO15243 131 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 C15orf53Q8NAA6 179 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 PHLDA1Q8WV24 401 aaPredicted RBP12.13□□□□□ -0.47
CHL1-202ENST00000397491 RASL10AQ92737 203 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 SIGLEC9Q9Y336 463 aa12.13□□□□□ -0.47
CHL1-202ENST00000397491 ANK1P16157 1881 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 FCN3O75636 299 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 WISP1O95388 367 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 NDPQ00604 133 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 OVOL2Q9BRP0 275 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 A0A1W2PPI3 338 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 NDUFS7O75251 213 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 TRACP01848 142 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 INAFM2P0DMQ5 153 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 PDE6HQ13956 83 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 LINC00527Q9UJ94 153 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 FAM208BQ5VWN6 2430 aa12.12□□□□□ -0.47
CHL1-202ENST00000397491 NTN5Q8WTR8 489 aaPredicted RBP12.11□□□□□ -0.47
CHL1-202ENST00000397491 C9orf139Q6ZV77 190 aa12.11□□□□□ -0.47
CHL1-202ENST00000397491 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
CHL1-202ENST00000397491 TAX1BP3O14907 124 aa12.11□□□□□ -0.47
CHL1-202ENST00000397491 LINC00477Q96M19 166 aa12.11□□□□□ -0.47
CHL1-202ENST00000397491 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
CHL1-202ENST00000397491 WIPF2Q8TF74 440 aaPredicted RBP12.1□□□□□ -0.47
CHL1-202ENST00000397491 MUC6Q6W4X9 2439 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 TRAV26-2A0A0B4J265 109 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 HLA-DRB4P13762 266 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 HLA-DRB4X5D2U9 266 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 BOD1L2Q8IYS8 172 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 ZC2HC1AQ96GY0 325 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 JPT2Q9H910 190 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 ZNF524Q96C55 264 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 GAFA1Q96PS6 74 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 DOCK10Q96BY6 2186 aa12.1□□□□□ -0.47
CHL1-202ENST00000397491 TRBV19A0A075B6N1 114 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 F8VRH5 84 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 ZNRD1Q9P1U0 126 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 PRR19A6NJB7 356 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 IGLC1P0CG04 106 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 TMEM105Q8N8V8 129 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 DNAJC30Q96LL9 226 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 CHCHD5Q9BSY4 110 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 SBF1O95248 1867 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 EFNA4P52798 201 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 LINC00173Q6ZV60 143 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 NEU4Q8WWR8 484 aaPredicted RBP12.09□□□□□ -0.47
CHL1-202ENST00000397491 FER1L5A0AVI2 2057 aa12.09□□□□□ -0.47
CHL1-202ENST00000397491 ATP5J2P56134 94 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 VWC2LB2RUY7 222 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 COLCA1Q6ZS62 124 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 CARD19Q96LW7 228 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 RNF5Q99942 180 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 SCRT2Q9NQ03 307 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 NDUFA4L2Q9NRX3 87 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 WDR90Q96KV7 1748 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 HLA-DMBP28068 263 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 C1orf159Q96HA4 380 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms