RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GPN1Q9HCN4 374 aaPredicted RBP12.1□□□□□ -0.47
EXOSC3-202ENST00000396521 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
EXOSC3-202ENST00000396521 PMS2P5A8MQ11 134 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 HOXB5P09067 269 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 DLK1P80370 383 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 ZNF431Q8TF32 576 aaPredicted RBP12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 UHRF2Q96PU4 802 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 ODF3Q96PU9 254 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 ZNF586Q9NXT0 402 aa12.09□□□□□ -0.47
EXOSC3-202ENST00000396521 A0A0J9YY99 117 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 GAGE12BA1L429 117 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 INMT-MINDY4F8WBC2 141 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 H3BP45 60 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 GAGE7O76087 117 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 GAGE12FP0CL80 117 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 GAGE12GP0CL81 117 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 GAGE12IP0CL82 117 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 HOXA5P20719 270 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 BPIFA4PQ86YQ2 179 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 MITD1Q8WV92 249 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 PYGO2Q9BRQ0 406 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 ARV1Q9H2C2 271 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 PSENENQ9NZ42 101 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 PXMP4Q9Y6I8 212 aa12.08□□□□□ -0.48
EXOSC3-202ENST00000396521 MRPS12O15235 138 aaKnown RBP12.07□□□□□ -0.48
EXOSC3-202ENST00000396521 PRAF2O60831 178 aa12.07□□□□□ -0.48
EXOSC3-202ENST00000396521 RGS21Q2M5E4 152 aa12.07□□□□□ -0.48
EXOSC3-202ENST00000396521 GFI1BQ5VTD9 330 aa12.07□□□□□ -0.48
EXOSC3-202ENST00000396521 ZNF546Q86UE3 836 aa12.07□□□□□ -0.48
EXOSC3-202ENST00000396521 SMIM8Q96KF7 97 aa12.07□□□□□ -0.48
EXOSC3-202ENST00000396521 MGAT4CQ9UBM8 478 aa12.07□□□□□ -0.48
EXOSC3-202ENST00000396521 GOSR2O14653 212 aa12.06□□□□□ -0.48
EXOSC3-202ENST00000396521 SIVA1O15304 175 aa12.06□□□□□ -0.48
EXOSC3-202ENST00000396521 LEPP41159 167 aa12.06□□□□□ -0.48
EXOSC3-202ENST00000396521 LINC00315P59091 139 aa12.06□□□□□ -0.48
EXOSC3-202ENST00000396521 POLR2GP62487 172 aaKnown RBP eCLIP12.06□□□□□ -0.48
EXOSC3-202ENST00000396521 NFE4Q86UQ8 179 aa12.06□□□□□ -0.48
EXOSC3-202ENST00000396521 OR10P1Q8NGE3 313 aa12.06□□□□□ -0.48
EXOSC3-202ENST00000396521 HERC1Q15751 4861 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 GUK1Q16774 197 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 PATE2Q6UY27 113 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 LINC00305Q7Z4B0 112 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 C12orf45Q8N5I9 185 aaPredicted RBP12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 ZNF680Q8NEM1 530 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 GGACTQ9BVM4 153 aa12.05□□□□□ -0.48
EXOSC3-202ENST00000396521 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
EXOSC3-202ENST00000396521 FAM25EA8MYX2 175 aa12.04□□□□□ -0.48
EXOSC3-202ENST00000396521 K7EP13 123 aa12.04□□□□□ -0.48
EXOSC3-202ENST00000396521 TAS2R30P59541 319 aa12.04□□□□□ -0.48
EXOSC3-202ENST00000396521 Q6ZRN7 208 aaPredicted RBP12.04□□□□□ -0.48
EXOSC3-202ENST00000396521 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
EXOSC3-202ENST00000396521 MARVELD1Q9BSK0 173 aa12.04□□□□□ -0.48
EXOSC3-202ENST00000396521 A0A096LPF7 62 aa12.03□□□□□ -0.48
EXOSC3-202ENST00000396521 CCSO14618 274 aa12.03□□□□□ -0.48
EXOSC3-202ENST00000396521 SLAQ13239 276 aa12.03□□□□□ -0.48
EXOSC3-202ENST00000396521 IAH1Q2TAA2 248 aaPredicted RBP12.03□□□□□ -0.48
EXOSC3-202ENST00000396521 TMEM14EPQ6UXP3 125 aa12.03□□□□□ -0.48
EXOSC3-202ENST00000396521 FRZBQ92765 325 aa12.03□□□□□ -0.48
EXOSC3-202ENST00000396521 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
EXOSC3-202ENST00000396521 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 C5orf51A6NDU8 294 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 SSNA1O43805 119 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 COX7A2P2O60397 106 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 IFNA5P01569 189 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 KIR3DS1Q14943 382 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.49
EXOSC3-202ENST00000396521 TRAV12-3A0A0B4J271 114 aa12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 SSSCA1O60232 199 aa12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 TSC22D2O75157 780 aa12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 METTL15P1P0C7V9 234 aa12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 RRAS2P62070 204 aaPredicted RBP12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 RAB31Q13636 194 aa12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 Q6ZTI0 123 aa12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 SAT2Q96F10 170 aaPredicted RBP12.01□□□□□ -0.49
EXOSC3-202ENST00000396521 NPIPB6E9PJ23 425 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 AGPAT2O15120 278 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 ZNF253O75346 499 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 CT45A10P0DMU9 189 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 IGLC2P0DOY2 106 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 SLC38A11Q08AI6 406 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 C10orf113Q5VZT2 155 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 Q6ZRG5 221 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 ZBTB8BQ8NAP8 495 aaPredicted RBP12□□□□□ -0.49
EXOSC3-202ENST00000396521 MRPL53Q96EL3 112 aaKnown RBP12□□□□□ -0.49
EXOSC3-202ENST00000396521 GSKIPQ9P0R6 139 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 ICOSQ9Y6W8 199 aa12□□□□□ -0.49
EXOSC3-202ENST00000396521 PRAC2D3DTV9 90 aa11.99□□□□□ -0.49
EXOSC3-202ENST00000396521 XGP55808 180 aa11.99□□□□□ -0.49
EXOSC3-202ENST00000396521 DNAJC4Q9NNZ3 241 aa11.99□□□□□ -0.49
EXOSC3-202ENST00000396521 FUT9Q9Y231 359 aa11.99□□□□□ -0.49
EXOSC3-202ENST00000396521 ZNF324O75467 553 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms