RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 EIF5AL1Q6IS14 154 aaKnown RBP3.22□□□□□ -1.89
GABPB1-204ENST00000396464 LCN15Q6UWW0 184 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 LINC00311Q8N616 119 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 RNF182Q8N6D2 247 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 APCDD1LQ8NCL9 501 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 OR5H6Q8NGV6 325 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 OR10AC1Q8NH08 325 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 SMCR5Q8TEV8 140 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF714Q96N38 554 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 MRPL57Q9BQC6 102 aaKnown RBP3.22□□□□□ -1.89
GABPB1-204ENST00000396464 FAIMQ9NVQ4 179 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 TRAPPC1Q9Y5R8 145 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 TRGV10A0A0A0MS01 117 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 A0A0G2JMM0 328 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 A0A1W2PPB8 328 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 GRIFINA4D1Z8 144 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 KIR3DP1A8MWS1 328 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 CCDC179H3BU77 68 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 SOD1P00441 154 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 AQP4P55087 323 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 MIAQ16674 131 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 UBE2SQ16763 222 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 SIGLECL1Q8N7X8 197 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 CYB561D1Q8N8Q1 229 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 BPIFB6Q8NFQ5 453 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 PRELID3AQ96N28 172 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 SCGB3A1Q96QR1 104 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 RNF5Q99942 180 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 COMMD3Q9UBI1 195 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 DLEC1Q9Y238 1755 aa3.21□□□□□ -1.9
GABPB1-204ENST00000396464 IGKV1D-37A0A075B6S9 117 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 C3orf84H3BNL1 204 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 CDC42EP2O14613 210 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 UQCRQO14949 82 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 ZNF861PO60384 105 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 NPYP01303 97 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 MT-ND6P03923 174 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 HLA-DRB4P13762 266 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 CDK6Q00534 326 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 FAM229BQ4G0N7 80 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 C2orf83Q53S99 150 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 SOSTDC1Q6X4U4 206 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 TEN1Q86WV5 123 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 MORN4Q8NDC4 146 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 DPH3Q96FX2 82 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 CIB3Q96Q77 187 aaPredicted RBP3.2□□□□□ -1.9
GABPB1-204ENST00000396464 GINS4Q9BRT9 223 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 SMDT1Q9H4I9 107 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 CCDC167Q9P0B6 97 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 HLA-DRB4X5D2U9 266 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 A0A1B0GUL6 1792 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 ECM29Q5VYK3 1845 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 ANKRD31Q8N7Z5 1873 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 ZNF638Q14966 1978 aaKnown RBP3.2□□□□□ -1.9
GABPB1-204ENST00000396464 FANCMQ8IYD8 2048 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 ZNF407Q9C0G0 2248 aa3.2□□□□□ -1.9
GABPB1-204ENST00000396464 H3BT86 120 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 M0R129 80 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 RER1O15258 196 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 ZNF883P0CG24 379 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 NUP214P35658 2090 aaPredicted RBP3.19□□□□□ -1.9
GABPB1-204ENST00000396464 ZNF93P35789 620 aaPredicted RBP3.19□□□□□ -1.9
GABPB1-204ENST00000396464 MPV17P39210 176 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 FOXA1P55317 472 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 C14orf177Q52M58 125 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 ZNF660Q6AZW8 331 aaPredicted RBP3.19□□□□□ -1.9
GABPB1-204ENST00000396464 IZUMO2Q6UXV1 221 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 TMEM91Q6ZNR0 172 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 C7orf65Q6ZTY9 151 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 C2orf91Q6ZV80 131 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 LYZL2Q7Z4W2 148 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 TIAM2Q8IVF5 1701 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 OR5D16Q8NGK9 328 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 PFN4Q8NHR9 129 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 MUC7Q8TAX7 377 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 ARAP2Q8WZ64 1704 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 TNFRSF19Q9NS68 423 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 TXNL4BQ9NX01 149 aaKnown RBP3.19□□□□□ -1.9
GABPB1-204ENST00000396464 NRXN2Q9P2S2 1712 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 IGKV3D-15A0A087WSY6 115 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 A0A1W2PQD3 144 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 EIF2B2P49770 351 aaKnown RBP3.19□□□□□ -1.9
GABPB1-204ENST00000396464 MYL5Q02045 173 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 NOXRED1Q6NXP6 359 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 GTF2H5Q6ZYL4 71 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 TMEM105Q8N8V8 129 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 ELSPBP1Q96BH3 223 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 IMMP2LQ96T52 175 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 SNHG12Q9BXW3 62 aa3.19□□□□□ -1.9
GABPB1-204ENST00000396464 PLXNB1O43157 2135 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 LRP5O75197 1615 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 C10orf71Q711Q0 1435 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 IGLV3-9A0A075B6K5 115 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 IGHV3-15A0A0B4J1V0 119 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 A0A0J9YW62 118 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 C17orf98A8MV24 154 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 PYYP10082 97 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 XCL1P47992 114 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms