RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 GTSCR1Q86UQ5 136 aa12.77□□□□□ -0.37
PDZD4-202ENST00000393758 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.37
PDZD4-202ENST00000393758 TIMD4Q96H15 378 aa12.77□□□□□ -0.37
PDZD4-202ENST00000393758 SFTA2Q6UW10 78 aa12.76□□□□□ -0.37
PDZD4-202ENST00000393758 CLEC3BP05452 202 aa12.76□□□□□ -0.37
PDZD4-202ENST00000393758 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
PDZD4-202ENST00000393758 MLST8Q9BVC4 326 aa12.76□□□□□ -0.37
PDZD4-202ENST00000393758 KLF12Q9Y4X4 402 aa12.76□□□□□ -0.37
PDZD4-202ENST00000393758 C19orf71A6NCJ1 209 aa12.76□□□□□ -0.37
PDZD4-202ENST00000393758 S100A4P26447 101 aaKnown RBP12.76□□□□□ -0.37
PDZD4-202ENST00000393758 BUB1B-PAK6H3BSN5 160 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 SMIM13P0DJ93 91 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 BMI1P35226 326 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 SPANXN1Q5VSR9 72 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 C21orf62Q9NYP8 219 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 DKK2Q9UBU2 259 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
PDZD4-202ENST00000393758 HLA-DMBP28068 263 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 JKAMPQ9P055 326 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 CEACAM3P40198 252 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 BCL6BQ8N143 479 aaPredicted RBP12.75□□□□□ -0.37
PDZD4-202ENST00000393758 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 SHANK2-AS3Q9BTD1 123 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 PRSS22Q9GZN4 317 aa12.75□□□□□ -0.37
PDZD4-202ENST00000393758 IGKV1-17P01599 117 aa12.74□□□□□ -0.37
PDZD4-202ENST00000393758 RBPJQ06330 500 aa12.74□□□□□ -0.37
PDZD4-202ENST00000393758 MTURNQ8N3F0 131 aa12.74□□□□□ -0.37
PDZD4-202ENST00000393758 SMIM12Q96EX1 92 aa12.74□□□□□ -0.37
PDZD4-202ENST00000393758 NPYP01303 97 aa12.74□□□□□ -0.37
PDZD4-202ENST00000393758 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
PDZD4-202ENST00000393758 MYOZ3Q8TDC0 251 aa12.74□□□□□ -0.37
PDZD4-202ENST00000393758 PLA2G2CQ5R387 149 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 Q6AWC8 147 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.73□□□□□ -0.37
PDZD4-202ENST00000393758 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
PDZD4-202ENST00000393758 NBR2O15453 112 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 HSD52Q0P140 79 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 MSRB1Q9NZV6 116 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 DPM3Q9P2X0 92 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 K7EP13 123 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 ERCC8Q13216 396 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 LINC01545Q5VT33 79 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 FAM104BQ5XKR9 115 aa12.73□□□□□ -0.37
PDZD4-202ENST00000393758 NDUFA3O95167 84 aa12.72□□□□□ -0.37
PDZD4-202ENST00000393758 HIST1H4GQ99525 98 aa12.72□□□□□ -0.37
PDZD4-202ENST00000393758 E7EQL1 145 aa12.72□□□□□ -0.37
PDZD4-202ENST00000393758 K7ERJ3 54 aa12.72□□□□□ -0.37
PDZD4-202ENST00000393758 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
PDZD4-202ENST00000393758 SAMD5Q5TGI4 173 aa12.72□□□□□ -0.37
PDZD4-202ENST00000393758 C1RLQ9NZP8 487 aa12.72□□□□□ -0.37
PDZD4-202ENST00000393758 A0A1B0GW15 77 aa12.71□□□□□ -0.37
PDZD4-202ENST00000393758 MYCNOSP40205 109 aa12.71□□□□□ -0.37
PDZD4-202ENST00000393758 PVRIGQ6DKI7 326 aa12.71□□□□□ -0.37
PDZD4-202ENST00000393758 NUP37Q8NFH4 326 aa12.71□□□□□ -0.37
PDZD4-202ENST00000393758 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.37
PDZD4-202ENST00000393758 C7orf69Q9H7B7 122 aa12.71□□□□□ -0.37
PDZD4-202ENST00000393758 APOBEC3AP31941 199 aaPredicted RBP12.71□□□□□ -0.38
PDZD4-202ENST00000393758 ZNF491Q8N8L2 437 aa12.71□□□□□ -0.38
PDZD4-202ENST00000393758 DCHS1Q96JQ0 3298 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 MGPP08493 103 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 VGLL1Q99990 258 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 RAB1BQ9H0U4 201 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 FAM71F2Q6NXP2 309 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 IGF2RP11717 2491 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 SCGB1D4Q6XE38 83 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 SIGLEC15Q6ZMC9 328 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 RNF182Q8N6D2 247 aa12.7□□□□□ -0.38
PDZD4-202ENST00000393758 C9orf118A6NHY6 69 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 FOXE3Q13461 319 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 PRR30Q53SZ7 412 aaPredicted RBP12.69□□□□□ -0.38
PDZD4-202ENST00000393758 Q6ZS92 163 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 OR1N2Q8NGR9 330 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 J3QR89 54 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 GOSR1O95249 250 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 SMAGPQ0VAQ4 97 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 LINC00311Q8N616 119 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 TMEM158Q8WZ71 300 aa12.69□□□□□ -0.38
PDZD4-202ENST00000393758 DOPEY2Q9Y3R5 2298 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 PTPRBP23467 1997 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 M0R381 172 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 EGR2P11161 476 aaPredicted RBP12.68□□□□□ -0.38
PDZD4-202ENST00000393758 TMEM78Q5T7P6 136 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 GTSF1LQ9H1H1 148 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 FABP5P3A8MUU1 101 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 CRYGCP07315 174 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 OR9G4Q8NGQ1 327 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 ZNF502Q8TBZ5 544 aa12.68□□□□□ -0.38
PDZD4-202ENST00000393758 B9A039 149 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 TEX22C9J3V5 150 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 I3L2K1 104 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 SPRY2O43597 315 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 DMXL2Q8TDJ6 3036 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 H3BRN7 92 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 K7EIM0 57 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 NDUFS7O75251 213 aa12.67□□□□□ -0.38
PDZD4-202ENST00000393758 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms