RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
PLXNA1-201ENST00000393409 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
PLXNA1-201ENST00000393409 TRAV3A0A0B4J244 114 aa10.63□□□□□ -0.71
PLXNA1-201ENST00000393409 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
PLXNA1-201ENST00000393409 IGHV1-3A0A0C4DH29 117 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 PSPNO60542 156 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 C9orf106Q8NAJ2 232 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 C7orf69Q9H7B7 122 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 NDUFC2O95298 119 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 C1QTNF4Q9BXJ3 329 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 FGFBP3Q8TAT2 258 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 TMEM200BQ69YZ2 307 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 SOCS3O14543 225 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 FXYD7P58549 80 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 TNCP24821 2201 aa10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 RNASE2P10153 161 aaKnown RBP10.62□□□□□ -0.71
PLXNA1-201ENST00000393409 SELENOKQ9Y6D0 94 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 A0A1B0GUS0 222 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 C14orf178Q8N769 122 aaPredicted RBP10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 NDUFB8O95169 186 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 IGLL1P15814 213 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 USMG5Q96IX5 58 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 TRAV41A0A0B4J266 112 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 CHCHD5Q9BSY4 110 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 CEP192Q8TEP8 1941 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 ETDBQ3ZM63 59 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 CLPSP04118 112 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 CD177Q8N6Q3 437 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 LINC01560Q8TB33 94 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 RCHY1Q96PM5 261 aa10.61□□□□□ -0.71
PLXNA1-201ENST00000393409 IGHV1-46P01743 117 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 SRSF2Q01130 221 aaKnown RBP10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 C20orf204Q6ZNR8 217 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 C1orf122Q6ZSJ8 110 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 RPL36AP83881 106 aaKnown RBP10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 ZNF876PQ49A33 203 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 RPL36ALQ969Q0 106 aaKnown RBP10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 MALRD1Q5VYJ5 2156 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 IGHV3-11P01762 117 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 CFHR1Q03591 330 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 Q6ZRM9 215 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 PRO1854Q9UHT4 67 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 E9PLN8 166 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 WNT2P09544 360 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 CFHR2P36980 270 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 K7EMI3 77 aa10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 ZNF474Q6S9Z5 364 aaPredicted RBP10.6□□□□□ -0.71
PLXNA1-201ENST00000393409 IGHV2-70DA0A0C4DH43 119 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 TMEM258P61165 79 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 C5orf64Q2M2E5 130 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 ATP1A1-AS1Q5TC04 95 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 FOXL2NBQ6ZUU3 175 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 CYYR1Q96J86 154 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 SIGLEC9Q9Y336 463 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 ARHGAP32A7KAX9 2087 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 TMEM126AQ9H061 195 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 SMKR1H3BMG3 65 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 M0R1W7 72 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 Q8TAT8 98 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 IGHV3OR16-10A0A075B7F0 116 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 VGLL1Q99990 258 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 TMEM14CQ9P0S9 112 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 FCN3O75636 299 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 GAGE7O76087 117 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 GAGE12FP0CL80 117 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 GAGE12GP0CL81 117 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 GAGE12IP0CL82 117 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 SRD5A1P18405 259 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 GAGE4Q13068 117 aa10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 KLF5Q13887 457 aaPredicted RBP10.59□□□□□ -0.71
PLXNA1-201ENST00000393409 BUB1B-PAK6H3BSN5 160 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 COA6Q5JTJ3 125 aaKnown RBP10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 A0A0G2JRQ6 117 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 SPXQ9BT56 116 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 SPRR3Q9UBC9 169 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 PRIMA1Q86XR5 153 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 FHL1Q13642 323 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
PLXNA1-201ENST00000393409 TCF15Q12870 199 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 KLHDC3Q9BQ90 382 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 TMEM178BH3BS89 294 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 ATG2AQ2TAZ0 1938 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 EFNA2O43921 213 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 UBL5Q9BZL1 73 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 INSP01308 110 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 TP53TG1Q9Y2A0 90 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 WNK1Q9H4A3 2382 aa10.57□□□□□ -0.72
PLXNA1-201ENST00000393409 F8VRH5 84 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms