RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 IGLV3-19P01714 112 aa13.63□□□□□ -0.23
TRAF3IP1-202ENST00000391993 TMPRSS3P57727 454 aa13.63□□□□□ -0.23
TRAF3IP1-202ENST00000391993 A8MWV9 139 aa13.63□□□□□ -0.23
TRAF3IP1-202ENST00000391993 EFNA4P52798 201 aa13.63□□□□□ -0.23
TRAF3IP1-202ENST00000391993 C12orf74Q32Q52 190 aa13.63□□□□□ -0.23
TRAF3IP1-202ENST00000391993 PRSS29PA6NIE9 313 aa13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 E7EUB6 86 aa13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 RPL13AP40429 203 aaKnown RBP13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 LGALS9BQ3B8N2 356 aa13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 LGALS9CQ6DKI2 356 aa13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 RNF183Q96D59 192 aa13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 DLX4Q92988 240 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 MSRB1Q9NZV6 116 aa13.62□□□□□ -0.23
TRAF3IP1-202ENST00000391993 IGLL5B9A064 214 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 FRYLO94915 3013 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 TRAV26-2A0A0B4J265 109 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 A0A1B0GW15 77 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 A0A1W2PPI3 338 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 SPRY2O43597 315 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 SH2D1AO60880 128 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 ATP5LO75964 103 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 Q6ZT83 130 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 BOD1L2Q8IYS8 172 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 TMEM155Q4W5P6 130 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 FAM104BQ5XKR9 115 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 C8orf46Q8TAG6 207 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 ATG2AQ2TAZ0 1938 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 CEND1Q8N111 149 aa13.61□□□□□ -0.23
TRAF3IP1-202ENST00000391993 PMS2CLQ68D20 193 aa13.6□□□□□ -0.23
TRAF3IP1-202ENST00000391993 TMEM105Q8N8V8 129 aa13.6□□□□□ -0.23
TRAF3IP1-202ENST00000391993 MT-ATP8P03928 68 aa13.6□□□□□ -0.23
TRAF3IP1-202ENST00000391993 HERVK_113P61574 105 aa13.6□□□□□ -0.23
TRAF3IP1-202ENST00000391993 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
TRAF3IP1-202ENST00000391993 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
TRAF3IP1-202ENST00000391993 ATRXP46100 2492 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 C1orf229Q6ZS94 237 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 SPRR3Q9UBC9 169 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 ARHGAP32A7KAX9 2087 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 HAX1O00165 279 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 SPRNQ5BIV9 151 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 FOXI2Q6ZQN5 318 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 IGKV2D-26A0A0A0MRZ7 120 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 C9JAW5 83 aa13.59□□□□□ -0.23
TRAF3IP1-202ENST00000391993 PRR33A8MZF0 331 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 DLX6P56179 175 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 C8orf86Q6ZUL3 223 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 C1orf159Q96HA4 380 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 CNTFRP26992 372 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 DEFB109BQ30KR1 87 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 C11orf53Q8IXP5 236 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 FAM90A27PA6NNH2 459 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 HTN1P15515 57 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ATP5IP56385 69 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 TRIP6Q15654 476 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 Q6AWC8 147 aa13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP1-202ENST00000391993 CHD9Q3L8U1 2897 aa13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 DKK1O94907 266 aa13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 TNFRSF6BO95407 300 aa13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 RNF125Q96EQ8 232 aa13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 A0A1B0GXF2 115 aa13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 PRR7Q8TB68 274 aa13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ECSCRQ19T08 205 aa13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 Q71RC1 249 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP1-202ENST00000391993 TMEM95Q3KNT9 176 aa13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 C9orf106Q8NAJ2 232 aa13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 RNF138Q8WVD3 245 aa13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 CITED1Q99966 193 aa13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 NXT2Q9NPJ8 142 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 KRTAP27-1Q3LI81 207 aa13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 IGFBPL1Q8WX77 278 aa13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ARRDC1-AS1Q9H2J1 176 aa13.56□□□□□ -0.24
TRAF3IP1-202ENST00000391993 TRAV2A0A0B4J234 112 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 C17orf58Q2M2W7 97 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 TMEM78Q5T7P6 136 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 NDUFA4L2Q9NRX3 87 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 IGHV1-18A0A0C4DH31 117 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 PRSS46E5RG02 174 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 NPC2P61916 151 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 FAM74A4Q5TZK3 123 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 NEGR1Q7Z3B1 354 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 FGF6P10767 208 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 GFRA4Q9GZZ7 299 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 UBALD2Q8IYN6 164 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ZNF492Q9P255 531 aa13.55□□□□□ -0.24
TRAF3IP1-202ENST00000391993 FNDC10F2Z333 226 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 RNFT1Q5M7Z0 435 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 TSPAN13O95857 204 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 HERV-K104P63124 156 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 FAM27E3Q08E93 113 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ERCC8Q13216 396 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 CT83Q5H943 113 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 UFSP1Q6NVU6 142 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 SPANXB1Q9NS25 103 aaPredicted RBP13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 TRAV12-3A0A0B4J271 114 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ZNF562Q6V9R5 426 aa13.54□□□□□ -0.24
TRAF3IP1-202ENST00000391993 PHLDA3Q9Y5J5 127 aa13.53□□□□□ -0.24
TRAF3IP1-202ENST00000391993 SLC25A16P16260 332 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms