RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 IGKV1-16P04430 117 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 LINC00032P0C843 101 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 DYNLT3P51808 116 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 TAS2R45P59539 299 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 UBE2BP63146 152 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 EIF5AP63241 154 aaKnown RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF846Q147U1 533 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 IQCJQ1A5X6 159 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 TDRG1Q3Y452 100 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 TMEM155Q4W5P6 130 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 RNASE13Q5GAN3 156 aaKnown RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 C10orf91Q5T1B1 145 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 FAM104BQ5XKR9 115 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 HCP5Q6MZN7 132 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 SPATA12Q7Z6I5 190 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 BPIFA4PQ86YQ2 179 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF101Q8IZC7 436 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 ORMDL3Q8N138 153 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 HIST3H2BBQ8N257 126 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 SVBPQ8N300 66 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 C10orf126Q8N4M7 172 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 C3orf56Q8N813 242 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 MORN4Q8NDC4 146 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 BPIFB6Q8NFQ5 453 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 OR5D16Q8NGK9 328 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 OR5AK2Q8NH90 309 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 ITLN2Q8WWU7 325 aaPredicted RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 PSMF1Q92530 271 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 LSM10Q969L4 123 aaKnown RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 PRELID3AQ96N28 172 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 MCEEQ96PE7 176 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 AQP10Q96PS8 301 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 PKMYT1Q99640 499 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 SHANK2-AS3Q9BTD1 123 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 SLC35B3Q9H1N7 401 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 NPVFQ9HCQ7 196 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 C8orf17Q9NRJ1 99 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 TXNL4BQ9NX01 149 aaKnown RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 LSM2Q9Y333 95 aaKnown RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 SERP1Q9Y6X1 66 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 HELZP42694 1942 aaKnown RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 PLXNB3Q9ULL4 1909 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 CUL7Q14999 1698 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 QRICH2Q9H0J4 1663 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 OBSL1O75147 1896 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 CCDC88BA6NC98 1476 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 CACNA1DQ01668 2161 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 MCM3APO60318 1980 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 IGLV3-9A0A075B6K5 115 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV7-4-1A0A0J9YVY3 117 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 MCRIP1C9JLW8 97 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 APOC4-APOC2K7ER74 178 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 PDCD5O14737 125 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 LEPROTO15243 131 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 OR1I1O60431 355 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 HIST1H2BKO60814 126 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 EDF1O60869 148 aaKnown RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 NDUFB6O95139 128 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 IGLV3-25P01717 112 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 TRACP01848 142 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 HBDP02042 147 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 APOC2P02655 101 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 APOC3P02656 99 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 RBP4P02753 201 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 HIST1H2BJP06899 126 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 NMBP08949 121 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 TRGC1P0CF51 173 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 CGB3P0DN86 165 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 CGB7P0DN87 165 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 CCL3P10147 92 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 S100A4P26447 101 aaKnown RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 HLA-DMBP28068 263 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 CSN1S1P47710 185 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 CMC4P56277 68 aaPredicted RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 TSPEAR-AS2P59090 65 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 YPEL3P61236 119 aaPredicted RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 SNRPD3P62318 126 aaKnown RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 AKR1C1Q04828 323 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 RPL18Q07020 188 aaKnown RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 Q0VG73 95 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 PEA15Q15121 130 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 KISS1Q15726 138 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 KHDC3LQ587J8 217 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF678Q5SXM1 525 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 C9orf153Q5TBE3 101 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 OR2T2Q6IF00 324 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 EIF5AL1Q6IS14 154 aaKnown RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 UNQ5815/PRO19632Q6UWF5 114 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 ALKAL2Q6UX46 152 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 PATE2Q6UY27 113 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 Q6ZS92 163 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 C7orf65Q6ZTY9 151 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 ZFAND2AQ8N6M9 145 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 C10orf82Q8WW14 230 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 COPS9Q8WXC6 57 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 DIRC1Q969H9 104 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 MRPS24Q96EL2 167 aaKnown RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 YPEL2Q96QA6 119 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 S100A13Q99584 98 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 NPCDR1Q9BY65 106 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms