RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 CAMLGP49069 296 aa11.75□□□□□ -0.53
SMN2-201ENST00000380741 CNPY1Q3B7I2 92 aa11.75□□□□□ -0.53
SMN2-201ENST00000380741 SSX7Q7RTT5 188 aa11.75□□□□□ -0.53
SMN2-201ENST00000380741 LINC00612Q8N6U2 182 aa11.75□□□□□ -0.53
SMN2-201ENST00000380741 SAT2Q96F10 170 aaPredicted RBP11.75□□□□□ -0.53
SMN2-201ENST00000380741 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
SMN2-201ENST00000380741 LSM5Q9Y4Y9 91 aaKnown RBP11.75□□□□□ -0.53
SMN2-201ENST00000380741 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
SMN2-201ENST00000380741 TRAV26-1A0A087WT03 109 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 TRAV5A0A0B4J249 113 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 FAM25EA8MYX2 175 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 J3KRW8 73 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 PLA2G10O15496 165 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 CST7O76096 145 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 BCAP31P51572 246 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 OR5I1Q13606 314 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 CLINT1Q14677 625 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 ZNF846Q147U1 533 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 Q6ZRG5 221 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 NRARPQ7Z6K4 114 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 KRTAP4-5Q9BYR2 181 aa11.74□□□□□ -0.53
SMN2-201ENST00000380741 C16orf90A8MZG2 172 aa11.73□□□□□ -0.53
SMN2-201ENST00000380741 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
SMN2-201ENST00000380741 CAV2P51636 162 aa11.73□□□□□ -0.53
SMN2-201ENST00000380741 RAB31Q13636 194 aa11.73□□□□□ -0.53
SMN2-201ENST00000380741 CCDC28AQ8IWP9 274 aa11.73□□□□□ -0.53
SMN2-201ENST00000380741 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
SMN2-201ENST00000380741 C11orf1Q9H5F2 150 aa11.73□□□□□ -0.53
SMN2-201ENST00000380741 TRAV6A0A075B6T7 132 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 LYRM1O43325 122 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 M6PRP20645 277 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 HOXA5P20719 270 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 GUK1Q16774 197 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 OR1L4Q8NGR5 311 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 ODF3Q96PU9 254 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 SEC22CQ9BRL7 303 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 Q9H8V8 135 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 UQCC1Q9NVA1 299 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 WDR83OSQ9Y284 106 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 DNAH5Q8TE73 4624 aa11.72□□□□□ -0.53
SMN2-201ENST00000380741 A0A0J9YY99 117 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 GAGE12BA1L429 117 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 C5orf51A6NDU8 294 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 NPIPB6E9PJ23 425 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 GAGE7O76087 117 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 RLN2P04090 185 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 GAGE12FP0CL80 117 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 GAGE12GP0CL81 117 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 GAGE12IP0CL82 117 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 LEPP41159 167 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 RXFP4Q8TDU9 374 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.53
SMN2-201ENST00000380741 PFDN5Q99471 154 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
SMN2-201ENST00000380741 UBE2L5PA0A1B0GUS4 154 aa11.7□□□□□ -0.54
SMN2-201ENST00000380741 TCRBP04435 133 aa11.7□□□□□ -0.54
SMN2-201ENST00000380741 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
SMN2-201ENST00000380741 ZNF503Q96F45 646 aa11.7□□□□□ -0.54
SMN2-201ENST00000380741 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
SMN2-201ENST00000380741 NUDT15Q9NV35 164 aa11.7□□□□□ -0.54
SMN2-201ENST00000380741 M0R3E3 92 aa11.69□□□□□ -0.54
SMN2-201ENST00000380741 ZNF253O75346 499 aa11.69□□□□□ -0.54
SMN2-201ENST00000380741 BAXQ07812 192 aa11.69□□□□□ -0.54
SMN2-201ENST00000380741 C2orf50Q96LR7 162 aa11.69□□□□□ -0.54
SMN2-201ENST00000380741 PYGO2Q9BRQ0 406 aa11.69□□□□□ -0.54
SMN2-201ENST00000380741 TMPRSS5Q9H3S3 457 aa11.69□□□□□ -0.54
SMN2-201ENST00000380741 LYRM2Q9NU23 88 aaPredicted RBP11.69□□□□□ -0.54
SMN2-201ENST00000380741 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
SMN2-201ENST00000380741 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
SMN2-201ENST00000380741 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
SMN2-201ENST00000380741 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
SMN2-201ENST00000380741 PVALBP20472 110 aaPredicted RBP11.68□□□□□ -0.54
SMN2-201ENST00000380741 RPL29P47914 159 aaKnown RBP11.68□□□□□ -0.54
SMN2-201ENST00000380741 SULT1A1P50225 295 aa11.68□□□□□ -0.54
SMN2-201ENST00000380741 S100A10P60903 97 aa11.68□□□□□ -0.54
SMN2-201ENST00000380741 ESRGQ1W209 222 aa11.68□□□□□ -0.54
SMN2-201ENST00000380741 Q6ZTI0 123 aa11.68□□□□□ -0.54
SMN2-201ENST00000380741 C12orf45Q8N5I9 185 aaPredicted RBP11.68□□□□□ -0.54
SMN2-201ENST00000380741 H3BNG1 76 aa11.67□□□□□ -0.54
SMN2-201ENST00000380741 S100A11P31949 105 aa11.67□□□□□ -0.54
SMN2-201ENST00000380741 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
SMN2-201ENST00000380741 ERCC8Q13216 396 aa11.67□□□□□ -0.54
SMN2-201ENST00000380741 TMEM252Q8N6L7 170 aa11.67□□□□□ -0.54
SMN2-201ENST00000380741 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
SMN2-201ENST00000380741 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
SMN2-201ENST00000380741 Q9H3A6 140 aa11.67□□□□□ -0.54
SMN2-201ENST00000380741 C7orf71A4D174 169 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 NDUFB4O95168 129 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
SMN2-201ENST00000380741 FGF7P21781 194 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 IL15RAQ13261 267 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 RAB32Q13637 225 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 STX12Q86Y82 276 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 C11orf72Q8NBR9 251 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 GSN-AS1Q9NRJ2 163 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms