RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 IFITM3Q01628 133 aa17.55■□□□□ 0.4
TNFRSF4-201ENST00000379236 UBE2DNLQ8IWF7 75 aa17.55■□□□□ 0.4
TNFRSF4-201ENST00000379236 OR5C1Q8NGR4 320 aa17.55■□□□□ 0.4
TNFRSF4-201ENST00000379236 H3BQ15 152 aa17.54■□□□□ 0.4
TNFRSF4-201ENST00000379236 PRM2P04554 102 aa17.54■□□□□ 0.4
TNFRSF4-201ENST00000379236 NHLH2Q02577 135 aa17.54■□□□□ 0.4
TNFRSF4-201ENST00000379236 CHAC2Q8WUX2 184 aa17.54■□□□□ 0.4
TNFRSF4-201ENST00000379236 NPCDR1Q9BY65 106 aa17.54■□□□□ 0.4
TNFRSF4-201ENST00000379236 SSNA1O43805 119 aa17.53■□□□□ 0.4
TNFRSF4-201ENST00000379236 TAS2R60P59551 318 aa17.53■□□□□ 0.4
TNFRSF4-201ENST00000379236 POM121L12Q8N7R1 296 aa17.53■□□□□ 0.4
TNFRSF4-201ENST00000379236 THAP6Q8TBB0 222 aa17.53■□□□□ 0.4
TNFRSF4-201ENST00000379236 OR5AC2Q9NZP5 309 aa17.53■□□□□ 0.4
TNFRSF4-201ENST00000379236 DEFB130BP0DP73 79 aa17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 DEFB130AP0DP74 79 aa17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 CLINT1Q14677 625 aa17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 SAT2Q96F10 170 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 C16orf74Q96GX8 76 aa17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 KCNIP2Q9NS61 270 aa17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 TIMM9Q9Y5J7 89 aa17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 DNAH10Q8IVF4 4471 aa17.52■□□□□ 0.4
TNFRSF4-201ENST00000379236 ZNF253O75346 499 aa17.51■□□□□ 0.39
TNFRSF4-201ENST00000379236 C20orf144Q9BQM9 153 aa17.51■□□□□ 0.39
TNFRSF4-201ENST00000379236 MARVELD1Q9BSK0 173 aa17.51■□□□□ 0.39
TNFRSF4-201ENST00000379236 ZNF586Q9NXT0 402 aa17.51■□□□□ 0.39
TNFRSF4-201ENST00000379236 PRAC2D3DTV9 90 aa17.5■□□□□ 0.39
TNFRSF4-201ENST00000379236 H7BYZ3 331 aa17.5■□□□□ 0.39
TNFRSF4-201ENST00000379236 PET100P0DJ07 73 aa17.5■□□□□ 0.39
TNFRSF4-201ENST00000379236 AZU1P20160 251 aa17.5■□□□□ 0.39
TNFRSF4-201ENST00000379236 TMEM14CQ9P0S9 112 aa17.5■□□□□ 0.39
TNFRSF4-201ENST00000379236 LEPP41159 167 aa17.49■□□□□ 0.39
TNFRSF4-201ENST00000379236 TMEM88Q6PEY1 159 aa17.49■□□□□ 0.39
TNFRSF4-201ENST00000379236 CCDC28AQ8IWP9 274 aa17.49■□□□□ 0.39
TNFRSF4-201ENST00000379236 PARD6GQ9BYG4 376 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF4-201ENST00000379236 BATF3Q9NR55 127 aa17.49■□□□□ 0.39
TNFRSF4-201ENST00000379236 TRBV19A0A075B6N1 114 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 C17orf112F2Z3M2 114 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 J3KRW8 73 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 HIST1H1EP10412 219 aaKnown RBP17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 ZNF493Q6ZR52 646 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 BLNKQ8WV28 456 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 PPP1R1CQ8WVI7 109 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 AAMDCQ9H7C9 122 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 PRELID1Q9Y255 219 aa17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 TIMM8BQ9Y5J9 83 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF4-201ENST00000379236 PYYP10082 97 aa17.47■□□□□ 0.39
TNFRSF4-201ENST00000379236 PDE6HQ13956 83 aa17.47■□□□□ 0.39
TNFRSF4-201ENST00000379236 TMEM263Q8WUH6 116 aaKnown RBP17.47■□□□□ 0.39
TNFRSF4-201ENST00000379236 MRPL53Q96EL3 112 aaKnown RBP17.47■□□□□ 0.39
TNFRSF4-201ENST00000379236 H2BFSP57053 126 aa17.46■□□□□ 0.39
TNFRSF4-201ENST00000379236 FCN2Q15485 313 aa17.46■□□□□ 0.39
TNFRSF4-201ENST00000379236 GCSAMLQ5JQS6 135 aa17.46■□□□□ 0.39
TNFRSF4-201ENST00000379236 GFI1BQ5VTD9 330 aa17.46■□□□□ 0.39
TNFRSF4-201ENST00000379236 C15orf53Q8NAA6 179 aa17.46■□□□□ 0.39
TNFRSF4-201ENST00000379236 ODF3Q96PU9 254 aa17.46■□□□□ 0.39
TNFRSF4-201ENST00000379236 WDR61Q9GZS3 305 aaKnown RBP17.46■□□□□ 0.39
TNFRSF4-201ENST00000379236 NPIPB6E9PJ23 425 aa17.45■□□□□ 0.38
TNFRSF4-201ENST00000379236 F5H768 121 aa17.45■□□□□ 0.38
TNFRSF4-201ENST00000379236 H0YIZ8 118 aa17.45■□□□□ 0.38
TNFRSF4-201ENST00000379236 ATP5G1P05496 136 aa17.45■□□□□ 0.38
TNFRSF4-201ENST00000379236 ATP5G3P48201 142 aa17.45■□□□□ 0.38
TNFRSF4-201ENST00000379236 PLAC8L1A1L4L8 177 aa17.44■□□□□ 0.38
TNFRSF4-201ENST00000379236 CT45A10P0DMU9 189 aa17.44■□□□□ 0.38
TNFRSF4-201ENST00000379236 KIR3DS1Q14943 382 aa17.44■□□□□ 0.38
TNFRSF4-201ENST00000379236 ATP5SQ99766 215 aa17.44■□□□□ 0.38
TNFRSF4-201ENST00000379236 SLC25A2Q9BXI2 301 aa17.44■□□□□ 0.38
TNFRSF4-201ENST00000379236 MRPL32Q9BYC8 188 aaKnown RBP17.44■□□□□ 0.38
TNFRSF4-201ENST00000379236 NOP10Q9NPE3 64 aaKnown RBP17.44■□□□□ 0.38
TNFRSF4-201ENST00000379236 TRAV12-3A0A0B4J271 114 aa17.43■□□□□ 0.38
TNFRSF4-201ENST00000379236 M0R3E3 92 aa17.43■□□□□ 0.38
TNFRSF4-201ENST00000379236 MPC2O95563 127 aa17.43■□□□□ 0.38
TNFRSF4-201ENST00000379236 MIR17HGQ75NE6 70 aa17.43■□□□□ 0.38
TNFRSF4-201ENST00000379236 RNASE8Q8TDE3 154 aaKnown RBP17.43■□□□□ 0.38
TNFRSF4-201ENST00000379236 CBY3A6NI87 242 aa17.42■□□□□ 0.38
TNFRSF4-201ENST00000379236 SNURFLB1AK76 121 aa17.42■□□□□ 0.38
TNFRSF4-201ENST00000379236 M0R2N4 97 aa17.42■□□□□ 0.38
TNFRSF4-201ENST00000379236 EXOC3-AS1Q8N2X6 119 aa17.42■□□□□ 0.38
TNFRSF4-201ENST00000379236 SCGB1C1Q8TD33 95 aa17.42■□□□□ 0.38
TNFRSF4-201ENST00000379236 ATG101Q9BSB4 218 aa17.42■□□□□ 0.38
TNFRSF4-201ENST00000379236 OR51M1Q9H341 326 aa17.42■□□□□ 0.38
TNFRSF4-201ENST00000379236 NDUFB4O95168 129 aa17.41■□□□□ 0.38
TNFRSF4-201ENST00000379236 IFNA5P01569 189 aa17.41■□□□□ 0.38
TNFRSF4-201ENST00000379236 ERCC8Q13216 396 aa17.41■□□□□ 0.38
TNFRSF4-201ENST00000379236 ICAM4Q14773 271 aa17.41■□□□□ 0.38
TNFRSF4-201ENST00000379236 RNF212Q495C1 297 aa17.41■□□□□ 0.38
TNFRSF4-201ENST00000379236 HSPB11Q9Y547 144 aa17.41■□□□□ 0.38
TNFRSF4-201ENST00000379236 RPL12P30050 165 aaKnown RBP17.4■□□□□ 0.38
TNFRSF4-201ENST00000379236 LINC00336Q6ZUF6 198 aa17.4■□□□□ 0.38
TNFRSF4-201ENST00000379236 LINC00477Q96M19 166 aa17.4■□□□□ 0.38
TNFRSF4-201ENST00000379236 PYGO2Q9BRQ0 406 aa17.4■□□□□ 0.38
TNFRSF4-201ENST00000379236 PAXXQ9BUH6 204 aa17.4■□□□□ 0.38
TNFRSF4-201ENST00000379236 FUT9Q9Y231 359 aa17.4■□□□□ 0.38
TNFRSF4-201ENST00000379236 IGLV2-18A0A075B6J9 118 aa17.39■□□□□ 0.37
TNFRSF4-201ENST00000379236 OR7C2O60412 319 aa17.39■□□□□ 0.37
TNFRSF4-201ENST00000379236 SLC25A5P05141 298 aaKnown RBP17.39■□□□□ 0.37
TNFRSF4-201ENST00000379236 OR10J4P0C629 311 aa17.39■□□□□ 0.37
TNFRSF4-201ENST00000379236 NBEAP1P0C6P0 100 aa17.39■□□□□ 0.37
TNFRSF4-201ENST00000379236 TMEM78Q5T7P6 136 aa17.39■□□□□ 0.37
TNFRSF4-201ENST00000379236 FAM122CQ6P4D5 195 aa17.39■□□□□ 0.37
TNFRSF4-201ENST00000379236 SMIM3Q9BZL3 60 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms