RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 RITA1Q96K30 269 aa16.77■□□□□ 0.28
SKI-201ENST00000378536 H3BRM9 83 aa16.77■□□□□ 0.28
SKI-201ENST00000378536 DEFB121Q5J5C9 76 aa16.77■□□□□ 0.28
SKI-201ENST00000378536 Q8N7P7 452 aa16.77■□□□□ 0.28
SKI-201ENST00000378536 PMCHL2Q9BQD1 86 aa16.77■□□□□ 0.28
SKI-201ENST00000378536 MRPL27Q9P0M9 148 aaKnown RBP16.77■□□□□ 0.28
SKI-201ENST00000378536 CYSLTR1Q9Y271 337 aa16.77■□□□□ 0.28
SKI-201ENST00000378536 LBHQ53QV2 105 aaPredicted RBP16.77■□□□□ 0.27
SKI-201ENST00000378536 IGHV7-81A0A0B4J1V7 117 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 COLCA2A8K830 154 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 PET117Q6UWS5 81 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 PTPRQQ9UMZ3 2332 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 SSBP2P81877 361 aaPredicted RBP16.76■□□□□ 0.27
SKI-201ENST00000378536 MED13LQ71F56 2210 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 IGHV7-4-1A0A0J9YVY3 117 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 IGLV1-47P01700 117 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 CHCHD1Q96BP2 118 aaKnown RBP16.76■□□□□ 0.27
SKI-201ENST00000378536 PRADC1Q9BSG0 188 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 DPH3P1Q9H4G8 78 aa16.76■□□□□ 0.27
SKI-201ENST00000378536 HINT1P49773 126 aaPredicted RBP16.75■□□□□ 0.27
SKI-201ENST00000378536 COTL1Q14019 142 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 VCX2Q9H322 139 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 TRAV8-6A0A0B4J262 113 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 PRR20EP86478 221 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 PRR20CP86479 221 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 PRR20DP86480 221 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 PRR20BP86481 221 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 PRR20AP86496 221 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 NIT1Q86X76 327 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 D6R8Y8 96 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 ZNF491Q8N8L2 437 aa16.75■□□□□ 0.27
SKI-201ENST00000378536 JOSD1Q15040 202 aaPredicted RBP16.74■□□□□ 0.27
SKI-201ENST00000378536 ZNF114Q8NC26 417 aa16.74■□□□□ 0.27
SKI-201ENST00000378536 ERASQ7Z444 233 aa16.74■□□□□ 0.27
SKI-201ENST00000378536 IGHV3-73A0A0B4J1V6 119 aa16.74■□□□□ 0.27
SKI-201ENST00000378536 NCR2O95944 276 aa16.74■□□□□ 0.27
SKI-201ENST00000378536 NCKAP5O14513 1909 aa16.74■□□□□ 0.27
SKI-201ENST00000378536 ADCYAP1P18509 176 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 GGTLC3B5MD39 225 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 COL5A1-AS1Q5SY13 56 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 GFRA4Q9GZZ7 299 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 SIRPDQ9H106 197 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 AMBPP02760 352 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 ZNF492Q9P255 531 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 VWC2Q2TAL6 325 aa16.73■□□□□ 0.27
SKI-201ENST00000378536 PCNX3Q9H6A9 2034 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 TMEM95Q3KNT9 176 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 ODF3L1Q8IXM7 274 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 ZNF843Q8N446 348 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 TSSC4Q9Y5U2 329 aaPredicted RBP16.72■□□□□ 0.27
SKI-201ENST00000378536 NDUFA3O95167 84 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 LINC00518Q8N0U6 118 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 C8orf49Q96NF6 230 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 ANKHD1Q8IWZ3 2542 aaKnown RBP16.72■□□□□ 0.27
SKI-201ENST00000378536 C9JQL5 133 aa16.72■□□□□ 0.27
SKI-201ENST00000378536 PFN1P07737 140 aaKnown RBP16.72■□□□□ 0.27
SKI-201ENST00000378536 H7C2G1 150 aa16.71■□□□□ 0.27
SKI-201ENST00000378536 BLCAPP62952 87 aa16.71■□□□□ 0.27
SKI-201ENST00000378536 MCRIP2Q9BUT9 160 aaKnown RBP16.71■□□□□ 0.27
SKI-201ENST00000378536 NCOA6Q14686 2063 aaPredicted RBP16.71■□□□□ 0.27
SKI-201ENST00000378536 DDTP30046 118 aa16.71■□□□□ 0.27
SKI-201ENST00000378536 C14orf178Q8N769 122 aaPredicted RBP16.71■□□□□ 0.27
SKI-201ENST00000378536 Q8N9W7 124 aa16.71■□□□□ 0.27
SKI-201ENST00000378536 ACACBO00763 2458 aa16.71■□□□□ 0.27
SKI-201ENST00000378536 LGALS1P09382 135 aaKnown RBP16.71■□□□□ 0.26
SKI-201ENST00000378536 SPINK13Q1W4C9 94 aa16.71■□□□□ 0.26
SKI-201ENST00000378536 FXYD5Q96DB9 178 aa16.71■□□□□ 0.26
SKI-201ENST00000378536 PRR31Q5SQ13 230 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 C5orf30Q96GV9 206 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 COX6CP09669 75 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 FOXE3Q13461 319 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 C5orf56Q8N8D9 126 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 IGLV2-14P01704 120 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 XCL2Q9UBD3 114 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 LAGE3Q14657 143 aa16.7■□□□□ 0.26
SKI-201ENST00000378536 IGHV3-53P01767 116 aa16.69■□□□□ 0.26
SKI-201ENST00000378536 RPL36AP83881 106 aaKnown RBP16.69■□□□□ 0.26
SKI-201ENST00000378536 RPL36ALQ969Q0 106 aaKnown RBP16.69■□□□□ 0.26
SKI-201ENST00000378536 CHCHD5Q9BSY4 110 aa16.69■□□□□ 0.26
SKI-201ENST00000378536 DMRT1Q9Y5R6 373 aa16.69■□□□□ 0.26
SKI-201ENST00000378536 LINC01549A6NIU2 74 aa16.69■□□□□ 0.26
SKI-201ENST00000378536 IGLV2-23P01705 113 aa16.69■□□□□ 0.26
SKI-201ENST00000378536 ARMS2P0C7Q2 107 aa16.69■□□□□ 0.26
SKI-201ENST00000378536 CD28P10747 220 aa16.69■□□□□ 0.26
SKI-201ENST00000378536 COL5A1P20908 1838 aaPredicted RBP16.68■□□□□ 0.26
SKI-201ENST00000378536 PIEZO1Q92508 2521 aa16.68■□□□□ 0.26
SKI-201ENST00000378536 GFI1BQ5VTD9 330 aa16.68■□□□□ 0.26
SKI-201ENST00000378536 I3L2K1 104 aa16.68■□□□□ 0.26
SKI-201ENST00000378536 HOXD3P31249 432 aaPredicted RBP16.68■□□□□ 0.26
SKI-201ENST00000378536 MRAP2Q96G30 205 aa16.68■□□□□ 0.26
SKI-201ENST00000378536 LSM4Q9Y4Z0 139 aaKnown RBP16.68■□□□□ 0.26
SKI-201ENST00000378536 IGLV11-55A0A075B6I3 123 aa16.68■□□□□ 0.26
SKI-201ENST00000378536 TOMM7Q9P0U1 55 aa16.68■□□□□ 0.26
SKI-201ENST00000378536 ZNF876PQ49A33 203 aa16.67■□□□□ 0.26
SKI-201ENST00000378536 LRRC75A-AS1Q8N1F1 130 aa16.67■□□□□ 0.26
SKI-201ENST00000378536 OR9G4Q8NGQ1 327 aa16.67■□□□□ 0.26
SKI-201ENST00000378536 PRR25Q96S07 402 aa16.67■□□□□ 0.26
SKI-201ENST00000378536 EML6Q6ZMW3 1958 aa16.67■□□□□ 0.26
SKI-201ENST00000378536 SMPXQ9UHP9 88 aa16.66■□□□□ 0.26
SKI-201ENST00000378536 LMO4P61968 165 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms