RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 PLXNB1O43157 2135 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 C20orf202A1L168 122 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 DLEU1O43261 78 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 LINC00614P0C842 121 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 ZNF25P17030 456 aaPredicted RBP9.63□□□□□ -0.87
VRK3-202ENST00000377011 CEACAM3P40198 252 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 CTRLP40313 264 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 UBE2G1P62253 170 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 KLF5Q13887 457 aaPredicted RBP9.63□□□□□ -0.87
VRK3-202ENST00000377011 PMCHL1Q16048 86 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 TCTEX1D4Q5JR98 221 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 PRR31Q5SQ13 230 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 COL5A1-AS1Q5SY13 56 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 Q8N976 141 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 C5orf17Q8NAS9 161 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 FMC1Q96HJ9 113 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 WNT10AQ9GZT5 417 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
VRK3-202ENST00000377011 DNAH3Q8TD57 4116 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 HYPMO75409 117 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 TOMM40O96008 361 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 FRMD6-AS1P0C7T7 363 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 SRIP30626 198 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 TCL1AP56279 114 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 KRTDAPP60985 99 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 MRPL54Q6P161 138 aaKnown RBP9.62□□□□□ -0.87
VRK3-202ENST00000377011 Q8N6K4 173 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 NUDT10Q8NFP7 164 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 NUDT11Q96G61 164 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 GPR82Q96P67 336 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 TMEM14CQ9P0S9 112 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 LINC00527Q9UJ94 153 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 NOTCH3Q9UM47 2321 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 ADARB2-AS1A8MUL3 147 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 F2Z2F3 143 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 CNTFRP26992 372 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 HES1Q14469 280 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 TDRG1Q3Y452 100 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 GFRA4Q9GZZ7 299 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 TPSG1Q9NRR2 321 aa9.62□□□□□ -0.87
VRK3-202ENST00000377011 MRPL36Q9P0J6 103 aaKnown RBP9.62□□□□□ -0.87
VRK3-202ENST00000377011 F11RQ9Y624 299 aaKnown RBP9.62□□□□□ -0.87
VRK3-202ENST00000377011 A0A1B0GXF2 115 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
VRK3-202ENST00000377011 NBEAP1P0C6P0 100 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 GP9P14770 177 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 TMEM11P17152 192 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 CD33P20138 364 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 EBI3Q14213 229 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 TNXAQ16473 311 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 C5orf56Q8N8D9 126 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 NUP35Q8NFH5 326 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
VRK3-202ENST00000377011 TMEM208Q9BTX3 173 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 PRSS22Q9GZN4 317 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 RNF24Q9Y225 148 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 GOLT1BQ9Y3E0 138 aa9.61□□□□□ -0.87
VRK3-202ENST00000377011 LTAP01374 205 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 G0S2P27469 103 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 MFAP2P55001 183 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 CCDC144NLQ6NUI1 221 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 PPP1R27Q86WC6 154 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 Q8N9W7 124 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 OR1B1Q8NGR6 318 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 C18orf32Q8TCD1 76 aa9.6□□□□□ -0.87
VRK3-202ENST00000377011 CITED2Q99967 270 aaPredicted RBP9.6□□□□□ -0.87
VRK3-202ENST00000377011 PGPA6NDG6 321 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 A8MWL6 223 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 TEX22C9J3V5 150 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 SPINK4O60575 86 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 FAM106CPP0CH98 169 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 ORM2P19652 201 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 NIT1Q86X76 327 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 RPP21Q9H633 154 aaKnown RBP9.59□□□□□ -0.87
VRK3-202ENST00000377011 OTORQ9NRC9 128 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 HIGD1AQ9Y241 93 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 MOB4Q9Y3A3 225 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 MOSP00540 346 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 IGLC2P0DOY2 106 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 IGLC3P0DOY3 106 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 PMCHP20382 165 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 SLC35B1P78383 322 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 SLAQ13239 276 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 MMDQ15546 238 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 KIAA1644Q3SXP7 199 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 NHLRC2Q8NBF2 726 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 FAM110DQ8TAY7 271 aaPredicted RBP9.59□□□□□ -0.87
VRK3-202ENST00000377011 RCHY1Q96PM5 261 aa9.59□□□□□ -0.87
VRK3-202ENST00000377011 ZFP30Q9Y2G7 519 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms