RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 ZNF562Q6V9R5 426 aa12.66□□□□□ -0.38
PBX3-204ENST00000373489 CEND1Q8N111 149 aa12.66□□□□□ -0.38
PBX3-204ENST00000373489 TMEM133Q9H2Q1 129 aa12.66□□□□□ -0.38
PBX3-204ENST00000373489 PLSCR4Q9NRQ2 329 aa12.66□□□□□ -0.38
PBX3-204ENST00000373489 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
PBX3-204ENST00000373489 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 PAX8Q06710 450 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 ZNF493Q6ZR52 646 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 RAI1Q7Z5J4 1906 aaPredicted RBP12.65□□□□□ -0.38
PBX3-204ENST00000373489 C20orf78Q9BR46 151 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 RP1L1Q8IWN7 2480 aaPredicted RBP12.65□□□□□ -0.38
PBX3-204ENST00000373489 E9PLD3 99 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 INS-IGF2F8WCM5 200 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 TWIST1Q15672 202 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 GATD1Q8NB37 220 aa12.65□□□□□ -0.38
PBX3-204ENST00000373489 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 A0A1B0GW15 77 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 CRYGCP07315 174 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 CT45A10P0DMU9 189 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 LEPP41159 167 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 ZC2HC1BQ5TFG8 222 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 SCNM1Q9BWG6 230 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 GEMIN7Q9H840 131 aaKnown RBP12.64□□□□□ -0.39
PBX3-204ENST00000373489 ZNF71Q9NQZ8 489 aaPredicted RBP12.64□□□□□ -0.39
PBX3-204ENST00000373489 DKK4Q9UBT3 224 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 U3KQK5 164 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 EVI2AP22794 236 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 CNTFRP26992 372 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 PRB3Q04118 309 aaPredicted RBP12.64□□□□□ -0.39
PBX3-204ENST00000373489 ODF1Q14990 250 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 GAGE13Q4V321 117 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 FOXC2Q99958 501 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 TMEM160Q9NX00 188 aa12.64□□□□□ -0.39
PBX3-204ENST00000373489 TNFAIP6P98066 277 aaPredicted RBP12.63□□□□□ -0.39
PBX3-204ENST00000373489 MAPKAPK5-AS1Q8N8E1 139 aa12.63□□□□□ -0.39
PBX3-204ENST00000373489 MSRB1Q9NZV6 116 aa12.63□□□□□ -0.39
PBX3-204ENST00000373489 A0A1B0GWB2 263 aa12.63□□□□□ -0.39
PBX3-204ENST00000373489 PRRG2O14669 202 aa12.63□□□□□ -0.39
PBX3-204ENST00000373489 HOXB4P17483 251 aaPredicted RBP12.63□□□□□ -0.39
PBX3-204ENST00000373489 FAM169BQ8N8A8 192 aa12.63□□□□□ -0.39
PBX3-204ENST00000373489 HIGD1BQ9P298 99 aa12.63□□□□□ -0.39
PBX3-204ENST00000373489 BOD1L1Q8NFC6 3051 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 IGKCP01834 107 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 VMA21Q3ZAQ7 101 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 TRBV19A0A075B6N1 114 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 TMEM75Q8N9X5 138 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
PBX3-204ENST00000373489 CEACAM4O75871 244 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 MRGPRG-AS1Q2M3A8 158 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 Q6AWC8 147 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 SEM1Q6ZVN7 128 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 TRAV40A0A0B4J280 105 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 SH2D1AO60880 128 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 GATA1P15976 413 aaPredicted RBP12.61□□□□□ -0.39
PBX3-204ENST00000373489 DLX1P56177 255 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 SIGLEC15Q6ZMC9 328 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 TM2D2Q9BX73 214 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 SLC25A15Q9Y619 301 aa12.61□□□□□ -0.39
PBX3-204ENST00000373489 RPL27AP46776 148 aaKnown RBP12.6□□□□□ -0.39
PBX3-204ENST00000373489 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
PBX3-204ENST00000373489 DMXL2Q8TDJ6 3036 aa12.6□□□□□ -0.39
PBX3-204ENST00000373489 CCL8P80075 99 aa12.6□□□□□ -0.39
PBX3-204ENST00000373489 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
PBX3-204ENST00000373489 LINC00574Q9H8X3 128 aa12.6□□□□□ -0.39
PBX3-204ENST00000373489 LINC00312Q9Y6C7 94 aa12.6□□□□□ -0.39
PBX3-204ENST00000373489 S4R3C0 116 aa12.6□□□□□ -0.39
PBX3-204ENST00000373489 TPRP12270 2363 aaKnown RBP12.59□□□□□ -0.39
PBX3-204ENST00000373489 HIST1H4GQ99525 98 aa12.59□□□□□ -0.39
PBX3-204ENST00000373489 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
PBX3-204ENST00000373489 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
PBX3-204ENST00000373489 SYT8Q8NBV8 401 aa12.59□□□□□ -0.39
PBX3-204ENST00000373489 MGAQ8IWI9 3026 aa12.59□□□□□ -0.39
PBX3-204ENST00000373489 APOMO95445 188 aa12.58□□□□□ -0.39
PBX3-204ENST00000373489 TMEM14CQ9P0S9 112 aa12.58□□□□□ -0.39
PBX3-204ENST00000373489 CSMD1Q96PZ7 3565 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 ZZEF1O43149 2961 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 TCTEX1D4Q5JR98 221 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
PBX3-204ENST00000373489 TMEM158Q8WZ71 300 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 MAP1LC3AQ9H492 121 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
PBX3-204ENST00000373489 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
PBX3-204ENST00000373489 EGR2P11161 476 aaPredicted RBP12.58□□□□□ -0.4
PBX3-204ENST00000373489 MC5RP33032 325 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 Q8TAT8 98 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 PRO0461Q9UI25 63 aa12.58□□□□□ -0.4
PBX3-204ENST00000373489 FCN3O75636 299 aa12.57□□□□□ -0.4
PBX3-204ENST00000373489 DPM2O94777 84 aa12.57□□□□□ -0.4
PBX3-204ENST00000373489 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
PBX3-204ENST00000373489 ZMAT4Q9H898 229 aa12.57□□□□□ -0.4
PBX3-204ENST00000373489 GATA3P23771 443 aa12.57□□□□□ -0.4
PBX3-204ENST00000373489 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
PBX3-204ENST00000373489 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
PBX3-204ENST00000373489 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
PBX3-204ENST00000373489 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms