RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TP53TG3Q9ULZ0 132 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 NBPF19A0A087WUL8 3843 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 A0A087X0K7 114 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 NUPR1O60356 82 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 CRISP2P16562 243 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 PSG3Q16557 428 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 LBHQ53QV2 105 aaPredicted RBP19.26■□□□□ 0.67
CTSA-203ENST00000372459 ZNF492Q9P255 531 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 GRIFINA4D1Z8 144 aa19.25■□□□□ 0.67
CTSA-203ENST00000372459 ZNF785A8K8V0 405 aa19.25■□□□□ 0.67
CTSA-203ENST00000372459 Q0VG73 95 aa19.25■□□□□ 0.67
CTSA-203ENST00000372459 WFDC11Q8NEX6 87 aa19.25■□□□□ 0.67
CTSA-203ENST00000372459 ZFP30Q9Y2G7 519 aa19.25■□□□□ 0.67
CTSA-203ENST00000372459 SNURFLB1AK76 121 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 CA1P00915 261 aaPredicted RBP19.24■□□□□ 0.67
CTSA-203ENST00000372459 TCL1AP56279 114 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 PSG8Q9UQ74 426 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 NDUFA4O00483 81 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 TRBV12-3P01733 135 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 IGHV3-11P01762 117 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 TMEM95Q3KNT9 176 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 U3KQE9 123 aa19.24■□□□□ 0.67
CTSA-203ENST00000372459 LINC00310P59036 64 aa19.23■□□□□ 0.67
CTSA-203ENST00000372459 OR4X2Q8NGF9 303 aa19.23■□□□□ 0.67
CTSA-203ENST00000372459 DAZAP1Q96EP5 407 aaKnown RBP19.23■□□□□ 0.67
CTSA-203ENST00000372459 ZNF331Q9NQX6 463 aaPredicted RBP19.23■□□□□ 0.67
CTSA-203ENST00000372459 NAGKQ9UJ70 344 aa19.23■□□□□ 0.67
CTSA-203ENST00000372459 IGHV3-66A0A0C4DH42 116 aa19.23■□□□□ 0.67
CTSA-203ENST00000372459 C19orf71A6NCJ1 209 aa19.23■□□□□ 0.67
CTSA-203ENST00000372459 ZNF207O43670 478 aaKnown RBP19.23■□□□□ 0.67
CTSA-203ENST00000372459 CIARTQ8N365 385 aaPredicted RBP19.23■□□□□ 0.67
CTSA-203ENST00000372459 IZUMO1RA6ND01 250 aa19.22■□□□□ 0.67
CTSA-203ENST00000372459 SCGB1D1O95968 90 aa19.22■□□□□ 0.67
CTSA-203ENST00000372459 IGHG4P01861 327 aa19.22■□□□□ 0.67
CTSA-203ENST00000372459 APOHP02749 345 aaPredicted RBP19.22■□□□□ 0.67
CTSA-203ENST00000372459 LINC00322Q6ZN03 302 aaPredicted RBP19.22■□□□□ 0.67
CTSA-203ENST00000372459 HOXA3O43365 443 aaPredicted RBP19.21■□□□□ 0.67
CTSA-203ENST00000372459 P01737 135 aa19.21■□□□□ 0.67
CTSA-203ENST00000372459 TSKUQ8WUA8 353 aa19.21■□□□□ 0.67
CTSA-203ENST00000372459 PRSS22Q9GZN4 317 aa19.21■□□□□ 0.67
CTSA-203ENST00000372459 RPP21Q9H633 154 aaKnown RBP19.21■□□□□ 0.67
CTSA-203ENST00000372459 ZANQ9Y493 2812 aa19.21■□□□□ 0.67
CTSA-203ENST00000372459 LCNL1Q6ZST4 164 aa19.21■□□□□ 0.67
CTSA-203ENST00000372459 C2orf88Q9BSF0 95 aa19.21■□□□□ 0.67
CTSA-203ENST00000372459 CREBBPQ92793 2442 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 IGHV3OR16-13A0A075B7E8 117 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 IGHV3-74A0A0B4J1X5 117 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 KIR2DL5BA0A0G2JN68 375 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 KIR2DL5BA0A0G2JPC4 375 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 SERF1AO75920 110 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 PSMB8P28062 276 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 CT83Q5H943 113 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 KIR2DL5AQ8N109 375 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 TEX29Q8N6K0 151 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 SLC50A1Q9BRV3 221 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 NAT8BQ9UHF3 227 aa19.2■□□□□ 0.66
CTSA-203ENST00000372459 IGHV3-49A0A0A0MS15 119 aa19.19■□□□□ 0.66
CTSA-203ENST00000372459 TMEM89A2RUT3 159 aa19.19■□□□□ 0.66
CTSA-203ENST00000372459 SPINK4O60575 86 aa19.19■□□□□ 0.66
CTSA-203ENST00000372459 TMEM136Q6ZRR5 245 aa19.19■□□□□ 0.66
CTSA-203ENST00000372459 NPFFR1Q9GZQ6 430 aa19.19■□□□□ 0.66
CTSA-203ENST00000372459 FBLL1A6NHQ2 334 aaKnown RBP19.19■□□□□ 0.66
CTSA-203ENST00000372459 CHEK1O14757 476 aa19.19■□□□□ 0.66
CTSA-203ENST00000372459 SLC35B1P78383 322 aa19.19■□□□□ 0.66
CTSA-203ENST00000372459 FRMD6-AS1P0C7T7 363 aa19.18■□□□□ 0.66
CTSA-203ENST00000372459 UNQ9165/PRO28630Q6UXU0 137 aa19.18■□□□□ 0.66
CTSA-203ENST00000372459 BAGE3Q86Y29 109 aa19.18■□□□□ 0.66
CTSA-203ENST00000372459 A8MWL6 223 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 SMAD7O15105 426 aaKnown RBP19.17■□□□□ 0.66
CTSA-203ENST00000372459 HLA-DQA1P01909 254 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 PRB4P10163 310 aaPredicted RBP19.17■□□□□ 0.66
CTSA-203ENST00000372459 C16orf54Q6UWD8 224 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 NPIPB6E9PJ23 425 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 OR10J3Q5JRS4 329 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 IGFL4Q6B9Z1 124 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 Q6ZWC4 215 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 ZC2HC1AQ96GY0 325 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 NEU1Q99519 415 aa19.17■□□□□ 0.66
CTSA-203ENST00000372459 IGKV2-40A0A087WW87 121 aaPredicted RBP19.16■□□□□ 0.66
CTSA-203ENST00000372459 IGKV2D-40P01614 121 aaPredicted RBP19.16■□□□□ 0.66
CTSA-203ENST00000372459 HLA-DMBP28068 263 aa19.16■□□□□ 0.66
CTSA-203ENST00000372459 MRPL54Q6P161 138 aaKnown RBP19.16■□□□□ 0.66
CTSA-203ENST00000372459 NUP35Q8NFH5 326 aa19.16■□□□□ 0.66
CTSA-203ENST00000372459 OR4B1Q8NGF8 309 aa19.16■□□□□ 0.66
CTSA-203ENST00000372459 LCN12Q6JVE5 192 aa19.15■□□□□ 0.66
CTSA-203ENST00000372459 ZNF702PQ9H963 129 aa19.15■□□□□ 0.66
CTSA-203ENST00000372459 PEF1Q9UBV8 284 aaKnown RBP19.15■□□□□ 0.66
CTSA-203ENST00000372459 HIGD1CA8MV81 97 aa19.15■□□□□ 0.66
CTSA-203ENST00000372459 RASL11AQ6T310 242 aa19.15■□□□□ 0.66
CTSA-203ENST00000372459 Q71RC1 249 aaPredicted RBP19.15■□□□□ 0.66
CTSA-203ENST00000372459 GLMPQ8WWB7 406 aa19.15■□□□□ 0.66
CTSA-203ENST00000372459 A0A1B0GV90 55 aa19.13■□□□□ 0.65
CTSA-203ENST00000372459 ZNF705FA8MVS1 300 aaPredicted RBP19.13■□□□□ 0.65
CTSA-203ENST00000372459 SAPCD1Q5SSQ6 148 aa19.13■□□□□ 0.65
CTSA-203ENST00000372459 WIPF2Q8TF74 440 aaPredicted RBP19.13■□□□□ 0.65
CTSA-203ENST00000372459 ASCL2Q99929 193 aa19.13■□□□□ 0.65
CTSA-203ENST00000372459 FOXC2Q99958 501 aa19.13■□□□□ 0.65
CTSA-203ENST00000372459 GFRA4Q9GZZ7 299 aa19.13■□□□□ 0.65
CTSA-203ENST00000372459 A0A1W2PS18 150 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms