RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 LGALS9BQ3B8N2 356 aa13.4□□□□□ -0.26
TMEM53-201ENST00000372235 TMEM263Q8WUH6 116 aaKnown RBP13.4□□□□□ -0.26
TMEM53-201ENST00000372235 SAT2Q96F10 170 aaPredicted RBP13.4□□□□□ -0.26
TMEM53-201ENST00000372235 TMEM14CQ9P0S9 112 aa13.4□□□□□ -0.26
TMEM53-201ENST00000372235 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
TMEM53-201ENST00000372235 IGSF23A1L1A6 192 aa13.39□□□□□ -0.27
TMEM53-201ENST00000372235 CBY3A6NI87 242 aa13.39□□□□□ -0.27
TMEM53-201ENST00000372235 ATP5G1P05496 136 aa13.39□□□□□ -0.27
TMEM53-201ENST00000372235 LEPP41159 167 aa13.39□□□□□ -0.27
TMEM53-201ENST00000372235 ATP5G3P48201 142 aa13.39□□□□□ -0.27
TMEM53-201ENST00000372235 DEFB130BP0DP73 79 aa13.38□□□□□ -0.27
TMEM53-201ENST00000372235 DEFB130AP0DP74 79 aa13.38□□□□□ -0.27
TMEM53-201ENST00000372235 TMEM88Q6PEY1 159 aa13.38□□□□□ -0.27
TMEM53-201ENST00000372235 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
TMEM53-201ENST00000372235 H3BQ15 152 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 PET100P0DJ07 73 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
TMEM53-201ENST00000372235 HTN1P15515 57 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 DEFA1P59665 94 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 DEFA3P59666 94 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 SOHLH1Q5JUK2 328 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 MORN5Q5VZ52 161 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 NPCDR1Q9BY65 106 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 PTTG2Q9NZH5 202 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 TIMM9Q9Y5J7 89 aa13.37□□□□□ -0.27
TMEM53-201ENST00000372235 TRBV19A0A075B6N1 114 aa13.36□□□□□ -0.27
TMEM53-201ENST00000372235 SLC17A3O00476 420 aa13.36□□□□□ -0.27
TMEM53-201ENST00000372235 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
TMEM53-201ENST00000372235 PLAC8L1A1L4L8 177 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 NPIPB6E9PJ23 425 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 C17orf112F2Z3M2 114 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 INMT-MINDY4F8WBC2 141 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 AZU1P20160 251 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 OR5C1Q8NGR4 320 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 RNASE8Q8TDE3 154 aaKnown RBP13.35□□□□□ -0.27
TMEM53-201ENST00000372235 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 PYGO2Q9BRQ0 406 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 ATG101Q9BSB4 218 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 ZNF586Q9NXT0 402 aa13.35□□□□□ -0.27
TMEM53-201ENST00000372235 TRAV5A0A0B4J249 113 aa13.34□□□□□ -0.27
TMEM53-201ENST00000372235 F5H768 121 aa13.34□□□□□ -0.27
TMEM53-201ENST00000372235 SNRPCP09234 159 aaKnown RBP13.34□□□□□ -0.27
TMEM53-201ENST00000372235 MRPL32Q9BYC8 188 aaKnown RBP13.34□□□□□ -0.27
TMEM53-201ENST00000372235 A6NHS1 94 aa13.33□□□□□ -0.28
TMEM53-201ENST00000372235 SNURFLB1AK76 121 aa13.33□□□□□ -0.28
TMEM53-201ENST00000372235 H3BTX0 84 aa13.33□□□□□ -0.28
TMEM53-201ENST00000372235 SLC25A5P05141 298 aaKnown RBP13.33□□□□□ -0.28
TMEM53-201ENST00000372235 NHLH2Q02577 135 aa13.33□□□□□ -0.28
TMEM53-201ENST00000372235 GFI1BQ5VTD9 330 aa13.33□□□□□ -0.28
TMEM53-201ENST00000372235 PRAC2D3DTV9 90 aa13.32□□□□□ -0.28
TMEM53-201ENST00000372235 PRM2P04554 102 aa13.32□□□□□ -0.28
TMEM53-201ENST00000372235 MARVELD1Q9BSK0 173 aa13.32□□□□□ -0.28
TMEM53-201ENST00000372235 NOP10Q9NPE3 64 aaKnown RBP13.32□□□□□ -0.28
TMEM53-201ENST00000372235 NMBP08949 121 aa13.31□□□□□ -0.28
TMEM53-201ENST00000372235 CCL18P55774 89 aa13.31□□□□□ -0.28
TMEM53-201ENST00000372235 LRRC37A5PQ49AS3 106 aa13.31□□□□□ -0.28
TMEM53-201ENST00000372235 ZNF680Q8NEM1 530 aa13.31□□□□□ -0.28
TMEM53-201ENST00000372235 M0R2N4 97 aa13.3□□□□□ -0.28
TMEM53-201ENST00000372235 SSNA1O43805 119 aa13.3□□□□□ -0.28
TMEM53-201ENST00000372235 CT45A10P0DMU9 189 aa13.3□□□□□ -0.28
TMEM53-201ENST00000372235 THAP6Q8TBB0 222 aa13.3□□□□□ -0.28
TMEM53-201ENST00000372235 WDR61Q9GZS3 305 aaKnown RBP13.3□□□□□ -0.28
TMEM53-201ENST00000372235 VPS13DQ5THJ4 4388 aa13.3□□□□□ -0.28
TMEM53-201ENST00000372235 PRSS29PA6NIE9 313 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 SIX6O95475 246 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 CLINT1Q14677 625 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 FCN2Q15485 313 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 TMEM78Q5T7P6 136 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 BLNKQ8WV28 456 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 PPP1R1CQ8WVI7 109 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 ZNF503Q96F45 646 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 OR51M1Q9H341 326 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 OR5AC2Q9NZP5 309 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 FRAS1Q86XX4 4008 aa13.29□□□□□ -0.28
TMEM53-201ENST00000372235 TRAV12-3A0A0B4J271 114 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 NDUFB4O95168 129 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 NUDT3O95989 172 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 NBEAP1P0C6P0 100 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 DAZ2Q13117 558 aaKnown RBP13.28□□□□□ -0.28
TMEM53-201ENST00000372235 Q6ZR54 194 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 LYPD1Q8N2G4 141 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 LINC00612Q8N6U2 182 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 ATP5SQ99766 215 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 SLC25A2Q9BXI2 301 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 DNAH6Q9C0G6 4158 aa13.28□□□□□ -0.28
TMEM53-201ENST00000372235 IGLV2-18A0A075B6J9 118 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 TRBV7-9A0A0J9YWB2 115 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 C7orf71A4D174 169 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 IFNA5P01569 189 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 PYYP10082 97 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 CSN1S1P47710 185 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 TAS2R45P59539 299 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 SCGB1C1Q8TD33 95 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 PAXXQ9BUH6 204 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 PARD6GQ9BYG4 376 aaPredicted RBP13.27□□□□□ -0.29
TMEM53-201ENST00000372235 FUT9Q9Y231 359 aa13.27□□□□□ -0.29
TMEM53-201ENST00000372235 KLLNB2CW77 178 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms