RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 TOMM7Q9P0U1 55 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 ATP6V0E1O15342 81 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 RIPPLY3P57055 190 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 C20orf144Q9BQM9 153 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 V9GYV3 84 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 CACNA1AO00555 2505 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 FCN3O75636 299 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 VWC2Q2TAL6 325 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 TECTAO75443 2155 aa9.5□□□□□ -0.89
DEPDC1-201ENST00000370966 GUSBP1Q15486 140 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 IGFL4Q6B9Z1 124 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 HOXA3O43365 443 aaPredicted RBP9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 MSMBP08118 114 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 NBL1P41271 181 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 KLF2Q9Y5W3 355 aaPredicted RBP9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 IGHV2-70DA0A0C4DH43 119 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 A8MWP6 167 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 LINC01356Q8N9X3 169 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 IGLC1P0CG04 106 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 ZNF479Q96JC4 524 aa9.49□□□□□ -0.89
DEPDC1-201ENST00000370966 OVOL3O00110 214 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 FNDC4Q9H6D8 234 aaPredicted RBP9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 hDV102S1A0JD36 115 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 TDGF1P13385 188 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 TMEM158Q8WZ71 300 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 TRAV12-3A0A0B4J271 114 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 TRGV4A0A0C4DH28 118 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 PRSS46E5RG02 174 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 SCGB1A1P11684 91 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 DMRTC2Q8IXT2 367 aaPredicted RBP9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 C14orf178Q8N769 122 aaPredicted RBP9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 C1orf122Q6ZSJ8 110 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 GTSCR1Q86UQ5 136 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 SPRY4Q9C004 299 aa9.48□□□□□ -0.89
DEPDC1-201ENST00000370966 COL4A3Q01955 1670 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 KIF26AQ9ULI4 1882 aaPredicted RBP9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 LHBP01229 141 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 EMP1P54849 157 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 FAM104BQ5XKR9 115 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 ZNF114Q8NC26 417 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 MEGF9Q9H1U4 602 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 H3BRN7 92 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 PRR31Q5SQ13 230 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 NPSP0C0P6 89 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 WT1P19544 449 aaPredicted RBP9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 BCL6BQ8N143 479 aaPredicted RBP9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 DKK4Q9UBT3 224 aa9.47□□□□□ -0.89
DEPDC1-201ENST00000370966 SMIM27A0A1W2PRY6 76 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 TDGF1P3P51864 188 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 MPV17L2Q567V2 206 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 K7EM74 188 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 TNFRSF6BO95407 300 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 SAMD5Q5TGI4 173 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 PRR25Q96S07 402 aa9.46□□□□□ -0.89
DEPDC1-201ENST00000370966 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
DEPDC1-201ENST00000370966 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
DEPDC1-201ENST00000370966 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
DEPDC1-201ENST00000370966 TMEM238C9JI98 176 aa9.46□□□□□ -0.9
DEPDC1-201ENST00000370966 ERCC8Q13216 396 aa9.46□□□□□ -0.9
DEPDC1-201ENST00000370966 C11orf44Q8N8P7 122 aa9.46□□□□□ -0.9
DEPDC1-201ENST00000370966 CSTL1Q9H114 145 aa9.46□□□□□ -0.9
DEPDC1-201ENST00000370966 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 TRAV2A0A0B4J234 112 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 TRBV7-9A0A0J9YWB2 115 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 DIAPH2-AS1Q14236 149 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 CFAP161Q6P656 301 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 SNHG12Q9BXW3 62 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 G3V318 75 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 POLR3KQ9Y2Y1 108 aaPredicted RBP9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 C2orf16Q68DN1 1984 aa9.45□□□□□ -0.9
DEPDC1-201ENST00000370966 A0A1B0GUS0 222 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 IGLC7A0M8Q6 106 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 SMKR1H3BMG3 65 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 RNASE1P07998 156 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 NOTCH2Q04721 2471 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 IL17RELQ6ZVW7 336 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 TMEM213A2RRL7 107 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 FXYD7P58549 80 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 CTSZQ9UBR2 303 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 CUL9Q8IWT3 2517 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 A0A087X0K7 114 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms