RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 M0R2Z0 102 aa10.93□□□□□ -0.66
SS18L1-202ENST00000370848 HIST1H1EP10412 219 aaKnown RBP10.93□□□□□ -0.66
SS18L1-202ENST00000370848 RAB2AP61019 212 aa10.93□□□□□ -0.66
SS18L1-202ENST00000370848 SPINK13Q1W4C9 94 aa10.93□□□□□ -0.66
SS18L1-202ENST00000370848 RPP25LQ8N5L8 163 aaKnown RBP10.93□□□□□ -0.66
SS18L1-202ENST00000370848 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
SS18L1-202ENST00000370848 MRPL32Q9BYC8 188 aaKnown RBP10.93□□□□□ -0.66
SS18L1-202ENST00000370848 FAT2Q9NYQ8 4349 aa10.93□□□□□ -0.66
SS18L1-202ENST00000370848 IGHV3OR16-12A0A075B7B8 117 aa10.92□□□□□ -0.66
SS18L1-202ENST00000370848 M0R3E3 92 aa10.92□□□□□ -0.66
SS18L1-202ENST00000370848 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
SS18L1-202ENST00000370848 OR10J4P0C629 311 aa10.92□□□□□ -0.66
SS18L1-202ENST00000370848 FXYD5Q96DB9 178 aa10.92□□□□□ -0.66
SS18L1-202ENST00000370848 C1QTNF4Q9BXJ3 329 aa10.92□□□□□ -0.66
SS18L1-202ENST00000370848 CRXO43186 299 aaPredicted RBP10.91□□□□□ -0.66
SS18L1-202ENST00000370848 ATP6V0CP27449 155 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 ZNF266Q14584 549 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 GUK1Q16774 197 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 RPL7L1Q6DKI1 246 aaKnown RBP10.91□□□□□ -0.66
SS18L1-202ENST00000370848 ZNF705AQ6ZN79 300 aaPredicted RBP10.91□□□□□ -0.66
SS18L1-202ENST00000370848 BAP18Q8IXM2 172 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 C1orf158Q8N1D5 194 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 EXOC3-AS1Q8N2X6 119 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 INO80EQ8NBZ0 244 aaPredicted RBP10.91□□□□□ -0.66
SS18L1-202ENST00000370848 C11orf45Q8TAV5 145 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 PAXXQ9BUH6 204 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 SH3BGRL3Q9H299 93 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 OR51M1Q9H341 326 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 TIMM9Q9Y5J7 89 aa10.91□□□□□ -0.66
SS18L1-202ENST00000370848 DNAH2Q9P225 4427 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 ARPC5O15511 151 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 OR7C2O60412 319 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 ZNF253O75346 499 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 MIFP14174 115 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 NANOS2P60321 138 aaKnown RBP10.9□□□□□ -0.66
SS18L1-202ENST00000370848 RHOBP62745 196 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 FAM122CQ6P4D5 195 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 PHYHIPLQ96FC7 376 aa10.9□□□□□ -0.66
SS18L1-202ENST00000370848 KIAA1109Q2LD37 5005 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 BOLA2-SMG1P6H3BVE0 249 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 HMGB3O15347 200 aaKnown RBP10.89□□□□□ -0.67
SS18L1-202ENST00000370848 PRM2P04554 102 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 M6PRP20645 277 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 KIR3DS1Q14943 382 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 ACOT6Q3I5F7 207 aaPredicted RBP10.89□□□□□ -0.67
SS18L1-202ENST00000370848 OR11H4Q8NGC9 324 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 RNF141Q8WVD5 230 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 CELA1Q9UNI1 258 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 DNAH17Q9UFH2 4485 aa10.89□□□□□ -0.67
SS18L1-202ENST00000370848 C11orf94C9JXX5 98 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 NBEAP1P0C6P0 100 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 UBE2L3P68036 154 aaKnown RBP10.88□□□□□ -0.67
SS18L1-202ENST00000370848 ERCC8Q13216 396 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 PDE6HQ13956 83 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 ICAM4Q14773 271 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 OR10G4Q8NGN3 311 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 OR10G9Q8NGN4 311 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 OR10G7Q8NGN6 311 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 OR2G3Q8NGZ4 309 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 C2CD4CQ8TF44 421 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 IGF2BP2-AS1Q96M15 143 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 PCLOQ9Y6V0 5065 aa10.88□□□□□ -0.67
SS18L1-202ENST00000370848 PKHD1P08F94 4074 aa10.87□□□□□ -0.67
SS18L1-202ENST00000370848 KHDC3LQ587J8 217 aa10.87□□□□□ -0.67
SS18L1-202ENST00000370848 OR10J6PQ8NGY7 276 aa10.87□□□□□ -0.67
SS18L1-202ENST00000370848 MRPL53Q96EL3 112 aaKnown RBP10.87□□□□□ -0.67
SS18L1-202ENST00000370848 PSMG3Q9BT73 122 aaPredicted RBP10.87□□□□□ -0.67
SS18L1-202ENST00000370848 CYTL1Q9NRR1 136 aa10.87□□□□□ -0.67
SS18L1-202ENST00000370848 PPP1R14DQ9NXH3 145 aa10.87□□□□□ -0.67
SS18L1-202ENST00000370848 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
SS18L1-202ENST00000370848 GOLT1BQ9Y3E0 138 aa10.87□□□□□ -0.67
SS18L1-202ENST00000370848 IGKV2-40A0A087WW87 121 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-202ENST00000370848 NPIPB6E9PJ23 425 aa10.86□□□□□ -0.67
SS18L1-202ENST00000370848 INSP01308 110 aa10.86□□□□□ -0.67
SS18L1-202ENST00000370848 IGKV2D-40P01614 121 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-202ENST00000370848 CT45A10P0DMU9 189 aa10.86□□□□□ -0.67
SS18L1-202ENST00000370848 TAS2R45P59539 299 aa10.86□□□□□ -0.67
SS18L1-202ENST00000370848 ZNF767PQ75MW2 155 aa10.86□□□□□ -0.67
SS18L1-202ENST00000370848 NEU1Q99519 415 aa10.86□□□□□ -0.67
SS18L1-202ENST00000370848 BORCS7-ASMTA0A0B4J1R7 106 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 A0A1W2PPV4 95 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 J3KRW8 73 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 AMBPP02760 352 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 CDC34P49427 236 aaPredicted RBP10.85□□□□□ -0.67
SS18L1-202ENST00000370848 EMP1P54849 157 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 RANP62826 216 aaKnown RBP10.85□□□□□ -0.67
SS18L1-202ENST00000370848 Q6ZNX1 250 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 SSX7Q7RTT5 188 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 KRTAP17-1Q9BYP8 105 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
SS18L1-202ENST00000370848 ZNF705GA8MUZ8 300 aaPredicted RBP10.84□□□□□ -0.67
SS18L1-202ENST00000370848 CDKN1BP46527 198 aa10.84□□□□□ -0.67
SS18L1-202ENST00000370848 RAB24Q969Q5 203 aa10.84□□□□□ -0.67
SS18L1-202ENST00000370848 TMEM208Q9BTX3 173 aa10.84□□□□□ -0.67
SS18L1-202ENST00000370848 Q9H3A6 140 aa10.84□□□□□ -0.67
SS18L1-202ENST00000370848 PRELID1Q9Y255 219 aa10.84□□□□□ -0.67
SS18L1-202ENST00000370848 LOC102723971A0A1B0GUV8 181 aa10.83□□□□□ -0.68
SS18L1-202ENST00000370848 HBE1P02100 147 aa10.83□□□□□ -0.68
SS18L1-202ENST00000370848 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms