RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 GFI1Q99684 422 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 GAGE7O76087 117 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 GAGE12FP0CL80 117 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 GAGE12GP0CL81 117 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 GAGE12IP0CL82 117 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 MRPL27Q9P0M9 148 aaKnown RBP10.2□□□□□ -0.78
HCFC1-202ENST00000369984 A0A087WWL8 130 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.2□□□□□ -0.78
HCFC1-202ENST00000369984 C3orf79P0CE67 100 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
HCFC1-202ENST00000369984 CEP192Q8TEP8 1941 aa10.2□□□□□ -0.78
HCFC1-202ENST00000369984 C22orf46C9J442 243 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 IGHV1-8P0DP01 117 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 ZNF883P0CG24 379 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 KLRD1Q13241 179 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 CSRP2Q16527 193 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 E9PQ18 207 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 NBASA2RRP1 2371 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 A0A1B0GWJ7 208 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 FAM231BA6NCW3 169 aa10.19□□□□□ -0.78
HCFC1-202ENST00000369984 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 MALRD1Q5VYJ5 2156 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 IGHG4P01861 327 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
HCFC1-202ENST00000369984 PTPRQQ9UMZ3 2332 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 C10orf55Q5SWW7 151 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 RPP25LQ8N5L8 163 aaKnown RBP10.18□□□□□ -0.78
HCFC1-202ENST00000369984 RMI2Q96E14 147 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 BRK1Q8WUW1 75 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 TRAV3A0A0B4J244 114 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 FGFBP3Q8TAT2 258 aa10.18□□□□□ -0.78
HCFC1-202ENST00000369984 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 ZNF329Q86UD4 541 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 NBL1P41271 181 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 H0YJW9 148 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 ZC2HC1BQ5TFG8 222 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 PPDPFLQ8WWR9 84 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 SPG11Q96JI7 2443 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 DSCR9P59020 149 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 HGFACQ04756 655 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 LYPD1Q8N2G4 141 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 ANKRD29Q8N6D5 301 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 RFNGQ9Y644 331 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 TNRC6BQ9UPQ9 1833 aaKnown RBP10.17□□□□□ -0.78
HCFC1-202ENST00000369984 ZNF664Q8N3J9 261 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 STPG4Q8N801 248 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 CYTL1Q9NRR1 136 aa10.17□□□□□ -0.78
HCFC1-202ENST00000369984 IGKV1-27A0A075B6S5 117 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 FOXF2Q12947 444 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 LIME1Q9H400 295 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 BUB1B-PAK6H3BSN5 160 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 NTF4P34130 210 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 MINOS1Q5TGZ0 78 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 KLHL30-AS1Q8NEE0 82 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 MINOS1-NBL1R4GNA1 71 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 IGLV3-32A0A0A0MS00 114 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 NEGR1Q7Z3B1 354 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 LY6G5BQ8NDX9 201 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 USMG5Q96IX5 58 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 TEX48A0A1B0GUV7 120 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 TMEM178BH3BS89 294 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 LY96Q9Y6Y9 160 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 F8W1H4 67 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 PYY3Q5JQD4 70 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 C9orf139Q6ZV77 190 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 ANXA2RQ3ZCQ2 193 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 UTF1Q5T230 341 aa10.16□□□□□ -0.78
HCFC1-202ENST00000369984 MRPL14Q6P1L8 145 aaKnown RBP10.15□□□□□ -0.78
HCFC1-202ENST00000369984 COL4A5P29400 1685 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 ZNF672Q499Z4 452 aaPredicted RBP10.15□□□□□ -0.78
HCFC1-202ENST00000369984 REG4Q9BYZ8 158 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 GFRA4Q9GZZ7 299 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 RNF114Q9Y508 228 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 CRYBA4P53673 196 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 NMSQ5H8A3 153 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 PRDM6Q9NQX0 595 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 IGKV1-12A0A0C4DH73 117 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 IGKV1D-12P01611 117 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 SRRM5B3KS81 715 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 NPSP0C0P6 89 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
HCFC1-202ENST00000369984 LHFPL1Q86WI0 220 aa10.15□□□□□ -0.79
HCFC1-202ENST00000369984 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.79
HCFC1-202ENST00000369984 IGFL4Q6B9Z1 124 aa10.15□□□□□ -0.79
HCFC1-202ENST00000369984 IL18BPO95998 194 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 CLPSP04118 112 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 MDS2Q8NDY4 140 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 IGLV3-12A0A075B6K2 115 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 C5orf64Q2M2E5 130 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 TRPT1Q86TN4 253 aaKnown RBP10.14□□□□□ -0.79
HCFC1-202ENST00000369984 PINLYPA6NC86 204 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 TMEM75Q8N9X5 138 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 NUP210Q8TEM1 1887 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms