RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 TRGC2P03986 189 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 NMBP08949 121 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 LINC00032P0C843 101 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 FABP4P15090 132 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 CRYBB3P26998 211 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 SDC2P34741 201 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 INPP1P49441 399 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 MP68P56378 58 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 HERVK_113P63121 156 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 AKR1C1Q04828 323 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 ERCC8Q13216 396 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 TMEM183BQ1AE95 376 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 MRPL54Q6P161 138 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 MORN3Q6PF18 240 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 UNQ5815/PRO19632Q6UWF5 114 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 AMTNQ6UX39 209 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 Q6ZTC4 211 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 RFLNAQ6ZTI6 216 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 WDR86Q86TI4 376 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 C6orf223Q8N319 242 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 C3orf22Q8N5N4 141 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 C3orf56Q8N813 242 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 ZIC4Q8N9L1 334 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 OR9G1Q8NH87 305 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 RHOXF1Q8NHV9 184 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 CHCHD10Q8WYQ3 142 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF524Q96C55 264 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 RBMXL1Q96E39 390 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 NEURL3Q96EH8 262 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 GNPNAT1Q96EK6 184 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 OR2A5Q96R48 311 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 PEBP4Q96S96 227 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 SPIN2AQ99865 258 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 SPIN2BQ9BPZ2 258 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 COQ4Q9Y3A0 265 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 HEBP2Q9Y5Z4 205 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 ENPP4Q9Y6X5 453 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 NOTCH3Q9UM47 2321 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 ARHGAP21Q5T5U3 1957 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 TENM2Q9NT68 2774 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 A0A096LNT2 108 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 OR2T8A6NH00 312 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 M0R233 179 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 PSPHP1O15172 72 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 GATA2P23769 480 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 OPRM1P35372 400 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 NXNL2Q5VZ03 156 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 Q6AWC8 147 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 Q6ZS49 121 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 Q6ZUT4 128 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 FAM19A3Q7Z5A8 133 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 TRAPPC6BQ86SZ2 158 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 RPS19BP1Q86WX3 136 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 MSRB3Q8IXL7 192 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF491Q8N8L2 437 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF709Q8N972 641 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 TMEM75Q8N9X5 138 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 LINC00301Q8NCQ3 95 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 OR2T10Q8NGZ9 312 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 OR10AC1Q8NH08 325 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 LINC01560Q8TB33 94 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 C10orf82Q8WW14 230 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 CCL19Q99731 98 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 TM2D3Q9BRN9 247 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 RNF126Q9BV68 326 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 TSSK6Q9BXA6 273 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 SEC11CQ9BY50 192 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 C11orf68Q9H3H3 251 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 UQCR10Q9UDW1 63 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 EML6Q6ZMW3 1958 aa3.78□□□□□ -1.8
ECHDC1-204ENST00000368292 TENM3Q9P273 2699 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 ROS1P08922 2347 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 IGLV3-10A0A075B6K4 115 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 TRAV27A0A087WT01 109 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 TRBV7-6A0A0J9YX20 115 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 FAM220BPB1ANY3 271 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 KLLNB2CW77 178 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 AGPAT2O15120 278 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 IGLV2-11P01706 119 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 MT-ND6P03923 174 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 H2AFZP0C0S5 128 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 NFYBP25208 207 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 VDAC2P45880 294 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 PSMB3P49720 205 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 INSL3P51460 131 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 P2RX1P51575 399 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 NCBP2P52298 156 aaKnown RBP eCLIP3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 ZNF90Q03938 601 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 RRN3P1Q2M238 152 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 SP6Q3SY56 376 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 C1orf140Q5VVS0 124 aa3.77□□□□□ -1.81
ECHDC1-204ENST00000368292 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms