RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ATP6V1FQ16864 119 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 LGALS9BQ3B8N2 356 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 RNF212Q495C1 297 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 TMEM88Q6PEY1 159 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 OR1L4Q8NGR5 311 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 LINC01587Q99440 93 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 PFDN5Q99471 154 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-202ENST00000366159 UBE2L5PA0A1B0GUS4 154 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 A0A1B0GVY2 172 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 RTL8CO15255 209 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 HTN3P15516 51 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 HBG1P69891 147 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 HBG2P69892 147 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 FCN2Q15485 313 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 Q6ZR54 194 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 STX12Q86Y82 276 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 RNASE8Q8TDE3 154 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 C20orf144Q9BQM9 153 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 TMEM14CQ9P0S9 112 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 PCLOQ9Y6V0 5065 aa9.62□□□□□ -0.87
TNFRSF1A-202ENST00000366159 DNAH11Q96DT5 4516 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 TRBV19A0A075B6N1 114 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 MPDU1O75352 247 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 NDUFB4O95168 129 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 NHLH2Q02577 135 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 BAXQ07812 192 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 ZNF493Q6ZR52 646 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 C16orf74Q96GX8 76 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 ODF3Q96PU9 254 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 PARD6GQ9BYG4 376 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 NMES1Q9C002 83 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 PPP1R14DQ9NXH3 145 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 NACAE9PAV3 2078 aa9.61□□□□□ -0.87
TNFRSF1A-202ENST00000366159 CBY3A6NI87 242 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 A6NJY4 79 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 NPIPB6E9PJ23 425 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 H0YIZ8 118 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 H7BYZ3 331 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 SIX6O95475 246 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 FGF7P21781 194 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 GFI1BQ5VTD9 330 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 C15orf53Q8NAA6 179 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 OR10J6PQ8NGY7 276 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 MRPL53Q96EL3 112 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 NPCDR1Q9BY65 106 aa9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 TIMM8BQ9Y5J9 83 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-202ENST00000366159 M0R2N4 97 aa9.59□□□□□ -0.87
TNFRSF1A-202ENST00000366159 DEFB130BP0DP73 79 aa9.59□□□□□ -0.87
TNFRSF1A-202ENST00000366159 DEFB130AP0DP74 79 aa9.59□□□□□ -0.87
TNFRSF1A-202ENST00000366159 ENKURQ8TC29 256 aa9.59□□□□□ -0.87
TNFRSF1A-202ENST00000366159 MARVELD1Q9BSK0 173 aa9.59□□□□□ -0.87
TNFRSF1A-202ENST00000366159 GPN1Q9HCN4 374 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-202ENST00000366159 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
TNFRSF1A-202ENST00000366159 PRAF2O60831 178 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 H2BFSP57053 126 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 PDE6HQ13956 83 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 GCSAMLQ5JQS6 135 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 OR5C1Q8NGR4 320 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 FAM167A-AS1Q96KT0 104 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 PTTG2Q9NZH5 202 aa9.58□□□□□ -0.88
TNFRSF1A-202ENST00000366159 E5RGE8 158 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 INMT-MINDY4F8WBC2 141 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 M0R3E3 92 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 ATP5G1P05496 136 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 PYYP10082 97 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 HTN1P15515 57 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 ATP5G3P48201 142 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 FAM3BP58499 235 aaPredicted RBP9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 SLC25A2Q9BXI2 301 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 SLC25A31Q9H0C2 315 aa9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 NOP10Q9NPE3 64 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-202ENST00000366159 IGLV2-18A0A075B6J9 118 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 F5H768 121 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 RLN2P04090 185 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 CYCSP99999 105 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 THAP6Q8TBB0 222 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 PRELID1Q9Y255 219 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 KLLNB2CW77 178 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 ZNF324O75467 553 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 LEPP41159 167 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 ERCC8Q13216 396 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 LINC00477Q96M19 166 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 WDR61Q9GZS3 305 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 AGPAT4-IT1Q9H0P7 198 aa9.56□□□□□ -0.88
TNFRSF1A-202ENST00000366159 TRAV12-3A0A0B4J271 114 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 SLC25A5P05141 298 aaKnown RBP9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 LRRC37A5PQ49AS3 106 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 MIR17HGQ75NE6 70 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms