RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 S100A11P31949 105 aa11.8□□□□□ -0.52
PDLIM7-201ENST00000355572 TMEM88Q6PEY1 159 aa11.8□□□□□ -0.52
PDLIM7-201ENST00000355572 THAP6Q8TBB0 222 aa11.8□□□□□ -0.52
PDLIM7-201ENST00000355572 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
PDLIM7-201ENST00000355572 HECTD4Q9Y4D8 3996 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 DNAH17Q9UFH2 4485 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 DNAH2Q9P225 4427 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 CT45A10P0DMU9 189 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 DAD1P61803 113 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 POM121L12Q8N7R1 296 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 ST6GAL2Q96JF0 529 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 FAM167A-AS1Q96KT0 104 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 NPCDR1Q9BY65 106 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 MED28Q9H204 178 aa11.79□□□□□ -0.52
PDLIM7-201ENST00000355572 FAT2Q9NYQ8 4349 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 J3KRW8 73 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 M0R2N4 97 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 CDKN1BP46527 198 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 ERCC8Q13216 396 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 CLINT1Q14677 625 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 GFI1BQ5VTD9 330 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 Q6ZRG5 221 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 STX12Q86Y82 276 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 OR5C1Q8NGR4 320 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 ASB13Q8WXK3 278 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 LINC01587Q99440 93 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 SLC25A2Q9BXI2 301 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 NMES1Q9C002 83 aa11.78□□□□□ -0.52
PDLIM7-201ENST00000355572 TRBV19A0A075B6N1 114 aa11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 DEFB130BP0DP73 79 aa11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 DEFB130AP0DP74 79 aa11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 HTN1P15515 57 aa11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 TSPOP30536 169 aa11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 MIR17HGQ75NE6 70 aa11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 RNASE8Q8TDE3 154 aaKnown RBP11.77□□□□□ -0.53
PDLIM7-201ENST00000355572 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 NPIPB6E9PJ23 425 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 EIF3GO75821 320 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 HBG1P69891 147 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 HBG2P69892 147 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 CD300CQ08708 224 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 RAB31Q13636 194 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 ATP6V1FQ16864 119 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 ZFP69Q49AA0 526 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 Q6ZQT7 251 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 S100A7AQ86SG5 101 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 EXOC3-AS1Q8N2X6 119 aa11.76□□□□□ -0.53
PDLIM7-201ENST00000355572 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 E5RGE8 158 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 RTL8CO15255 209 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 P0DMU3 169 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 FAM231AP0DMU4 169 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 FAM231CP0DMU5 169 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 TAS2R60P59551 318 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 PPP1R1CQ8WVI7 109 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 PFDN5Q99471 154 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 TMEM14CQ9P0S9 112 aa11.75□□□□□ -0.53
PDLIM7-201ENST00000355572 A0A1B0GVY2 172 aa11.74□□□□□ -0.53
PDLIM7-201ENST00000355572 SSNA1O43805 119 aa11.74□□□□□ -0.53
PDLIM7-201ENST00000355572 C1QBP02746 253 aa11.74□□□□□ -0.53
PDLIM7-201ENST00000355572 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
PDLIM7-201ENST00000355572 ZNF503Q96F45 646 aa11.74□□□□□ -0.53
PDLIM7-201ENST00000355572 WDR61Q9GZS3 305 aaKnown RBP11.74□□□□□ -0.53
PDLIM7-201ENST00000355572 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
PDLIM7-201ENST00000355572 TRAV12-3A0A0B4J271 114 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 ZNF253O75346 499 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 HIST1H1EP10412 219 aaKnown RBP11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 PRR9Q5T870 116 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 TMEM256Q8N2U0 113 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 FAM210BQ96KR6 192 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 FAM19A4Q96LR4 140 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 RNF24Q9Y225 148 aa11.73□□□□□ -0.53
PDLIM7-201ENST00000355572 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 MPC2O95563 127 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 GUK1Q16774 197 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 Q6ZR54 194 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 TMEM263Q8WUH6 116 aaKnown RBP11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 PHYHIPLQ96FC7 376 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 C16orf74Q96GX8 76 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 WFDC1Q9HC57 220 aa11.72□□□□□ -0.53
PDLIM7-201ENST00000355572 F5H768 121 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 H7BYZ3 331 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 MPDU1O75352 247 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 GIPP09681 153 aaPredicted RBP11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 OR10J4P0C629 311 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 BTN1A1Q13410 526 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 FXYD5Q96DB9 178 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 VGLL1Q99990 258 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 SLC25A31Q9H0C2 315 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 HSPB11Q9Y547 144 aa11.71□□□□□ -0.53
PDLIM7-201ENST00000355572 HERC2O95714 4834 aa11.71□□□□□ -0.54
PDLIM7-201ENST00000355572 RLN2P04090 185 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms