RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ALKBH6Q3KRA9 238 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 PAQR4Q8N4S7 273 aaPredicted RBP6.58□□□□□ -1.36
HTT-201ENST00000355072 ZNF114Q8NC26 417 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 CRYBA2P53672 197 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 DSCAML1Q8TD84 2053 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 IGHV3-7P01780 117 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 CENPVQ7Z7K6 275 aaPredicted RBP6.58□□□□□ -1.36
HTT-201ENST00000355072 IGKV1D-33P01593 117 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 IGKV1-33P01594 117 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 TFPI2P48307 235 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 PTPRSQ13332 1948 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 ITLN1Q8WWA0 313 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 A0A0A6YYD4 124 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 LYZL1Q6UWQ5 148 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 TMEM256Q8N2U0 113 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 TMEM158Q8WZ71 300 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 RMI2Q96E14 147 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 ZNF329Q86UD4 541 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 QRFPP83859 136 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 CCL19Q99731 98 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 FLG2Q5D862 2391 aaPredicted RBP6.57□□□□□ -1.36
HTT-201ENST00000355072 IGHG3P01860 377 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 SRSF3P84103 164 aaKnown RBP6.57□□□□□ -1.36
HTT-201ENST00000355072 C6orf226Q5I0X4 101 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 SRRM4A7MD48 611 aaKnown RBP6.57□□□□□ -1.36
HTT-201ENST00000355072 IL9P15248 144 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 EGR1P18146 543 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 TMEM240Q5SV17 173 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 PPP1R32Q7Z5V6 425 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 V9GYV3 84 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 CGB1A6NKQ9 187 aa6.57□□□□□ -1.36
HTT-201ENST00000355072 A6NNC1 897 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 KLK10O43240 276 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 IGHV3-13P01766 116 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 VWC2Q2TAL6 325 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 TRGV3P03979 118 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 FZR1Q9UM11 496 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 CENPVL1A0A0U1RR11 272 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 ST6GALNAC3Q8NDV1 305 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 PIFOQ8TCI5 191 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 TLN2Q9Y4G6 2542 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 J3QQQ9 107 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 G3V4G9 280 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 H0YJW9 148 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 LTBRP36941 435 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 C20orf173Q96LM9 149 aa6.56□□□□□ -1.36
HTT-201ENST00000355072 SP7Q8TDD2 431 aaPredicted RBP6.56□□□□□ -1.36
HTT-201ENST00000355072 HRKO00198 91 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 C1QCP02747 245 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 PMS2P5A8MQ11 134 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 NPSP0C0P6 89 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 FAM168AQ92567 244 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 WBP1Q96G27 269 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 TSSC4Q9Y5U2 329 aaPredicted RBP6.55□□□□□ -1.36
HTT-201ENST00000355072 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 TMEM256-PLSCR3K7ERE1 68 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 SNAI2O43623 268 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 TRBV25-1A0A075B6N4 114 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 IGHV3OR15-7A0A075B7D8 119 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 APELAP0DMC3 54 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 ADCYAP1P18509 176 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 ZNRF1Q8ND25 227 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 MUC7Q8TAX7 377 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 J3KRW8 73 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 EREGO14944 169 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 C2orf66Q6UXQ4 117 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 SCRT2Q9NQ03 307 aa6.55□□□□□ -1.36
HTT-201ENST00000355072 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 SHISA3A0PJX4 238 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 LINC00158P58513 81 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 CFHR1Q03591 330 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 C15orf32Q32M92 178 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 Q6ZWC4 215 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 SH2D1AO60880 128 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 C2CD3Q4AC94 2353 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 C15orf53Q8NAA6 179 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 CCL4P13236 92 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 GATA2P23769 480 aaPredicted RBP6.54□□□□□ -1.36
HTT-201ENST00000355072 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 FN1P02751 2386 aaKnown RBP6.54□□□□□ -1.36
HTT-201ENST00000355072 A4D1N5 150 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 AMELYQ99218 206 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 CRIM1Q9NZV1 1036 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 CCL25O15444 150 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 RBM3P98179 157 aaKnown RBP6.54□□□□□ -1.36
HTT-201ENST00000355072 ZNF524Q96C55 264 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 TRAV40A0A0B4J280 105 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 NDUFV3P56181 108 aaKnown RBP6.54□□□□□ -1.36
HTT-201ENST00000355072 ST6GALNAC6Q969X2 333 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 PATE4P0C8F1 98 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 SYNJ2BPP57105 145 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 TP53TG1Q9Y2A0 90 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 ZNF462Q96JM2 2506 aa6.54□□□□□ -1.36
HTT-201ENST00000355072 MST1P26927 711 aa6.53□□□□□ -1.36
HTT-201ENST00000355072 NDUFA4L2Q9NRX3 87 aa6.53□□□□□ -1.36
HTT-201ENST00000355072 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
HTT-201ENST00000355072 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms