RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KRTAP24-1Q3LI83 254 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 ATRAIDQ6UW56 229 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 RNF182Q8N6D2 247 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 ARL6IP6Q8N6S5 226 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 PRELID1Q9Y255 219 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 KLF12Q9Y4X4 402 aa11.79□□□□□ -0.52
CTSA-202ENST00000354880 FBN1P35555 2871 aaKnown RBP11.78□□□□□ -0.52
CTSA-202ENST00000354880 TRAV34A0A0B4J273 112 aa11.78□□□□□ -0.52
CTSA-202ENST00000354880 ISLRO14498 428 aa11.78□□□□□ -0.52
CTSA-202ENST00000354880 SOCS3O14543 225 aa11.78□□□□□ -0.52
CTSA-202ENST00000354880 UBE2G1P62253 170 aa11.78□□□□□ -0.52
CTSA-202ENST00000354880 PRIMA1Q86XR5 153 aa11.78□□□□□ -0.52
CTSA-202ENST00000354880 CITED1Q99966 193 aa11.78□□□□□ -0.52
CTSA-202ENST00000354880 PGPEP1LA6NFU8 196 aa11.77□□□□□ -0.52
CTSA-202ENST00000354880 K7EQM0 130 aa11.77□□□□□ -0.52
CTSA-202ENST00000354880 GNG4P50150 75 aa11.77□□□□□ -0.52
CTSA-202ENST00000354880 RPL23P62829 140 aaKnown RBP11.77□□□□□ -0.52
CTSA-202ENST00000354880 TMEM183BQ1AE95 376 aa11.77□□□□□ -0.52
CTSA-202ENST00000354880 CENPWQ5EE01 88 aa11.77□□□□□ -0.52
CTSA-202ENST00000354880 LCN12Q6JVE5 192 aa11.77□□□□□ -0.52
CTSA-202ENST00000354880 FMC1Q96HJ9 113 aa11.77□□□□□ -0.52
CTSA-202ENST00000354880 SERTM2A0A1B0GWG4 89 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 ZNF705FA8MVS1 300 aaPredicted RBP11.76□□□□□ -0.53
CTSA-202ENST00000354880 S100A9P06702 114 aaKnown RBP11.76□□□□□ -0.53
CTSA-202ENST00000354880 ADIRFQ15847 76 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 LINC01551Q86U37 167 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 GBGT1Q8N5D6 347 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 DCANP1Q8TF63 244 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 MRPL53Q96EL3 112 aaKnown RBP11.76□□□□□ -0.53
CTSA-202ENST00000354880 SGK494Q96LW2 274 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 IGF2BP2-AS1Q96M15 143 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 MS4A6AQ9H2W1 248 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 PRB4P10163 310 aaPredicted RBP11.76□□□□□ -0.53
CTSA-202ENST00000354880 PSG3Q16557 428 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 DYNLRB2Q8TF09 96 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 LY96Q9Y6Y9 160 aa11.76□□□□□ -0.53
CTSA-202ENST00000354880 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
CTSA-202ENST00000354880 DNASE2O00115 360 aaPredicted RBP11.75□□□□□ -0.53
CTSA-202ENST00000354880 SCO1O75880 301 aa11.75□□□□□ -0.53
CTSA-202ENST00000354880 RHEBQ15382 184 aa11.75□□□□□ -0.53
CTSA-202ENST00000354880 AURKAIP1Q9NWT8 199 aaPredicted RBP11.75□□□□□ -0.53
CTSA-202ENST00000354880 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
CTSA-202ENST00000354880 C7orf77A4D0Y5 90 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 B4DEV8 164 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 IGLV2-11P01706 119 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 PF4P02776 101 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 BAGE2Q86Y30 109 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 WFDC3Q8IUB2 231 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 RPS10P5Q9NQ39 176 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 IGKV2-40A0A087WW87 121 aaPredicted RBP11.74□□□□□ -0.53
CTSA-202ENST00000354880 IGKV2D-40P01614 121 aaPredicted RBP11.74□□□□□ -0.53
CTSA-202ENST00000354880 ID1P41134 155 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 FLI1Q01543 452 aaPredicted RBP11.74□□□□□ -0.53
CTSA-202ENST00000354880 DEFB114Q30KQ6 69 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 RBPMS2Q6ZRY4 209 aaKnown RBP11.74□□□□□ -0.53
CTSA-202ENST00000354880 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
CTSA-202ENST00000354880 TRBV6-1A0A0K0K1D8 114 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 PRAC2D3DTV9 90 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 LTAP01374 205 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 IGLV2-8P01709 118 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 TFPI2P48307 235 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 PRNTQ86SH4 94 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 Q86TA4 180 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 ZNF738Q8NE65 137 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 VWFP04275 2813 aa11.73□□□□□ -0.53
CTSA-202ENST00000354880 K7EN84 100 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 K7EQG2 157 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 TSPAN4O14817 238 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 TMEM61Q8N0U2 210 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 SMIM12Q96EX1 92 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 PSG8Q9UQ74 426 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 RBAKDNA6NC62 111 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 FBLL1A6NHQ2 334 aaKnown RBP11.72□□□□□ -0.53
CTSA-202ENST00000354880 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
CTSA-202ENST00000354880 CD300EQ496F6 205 aaPredicted RBP11.72□□□□□ -0.53
CTSA-202ENST00000354880 ISOC2Q96AB3 205 aa11.72□□□□□ -0.53
CTSA-202ENST00000354880 MGST1P10620 155 aaKnown RBP11.71□□□□□ -0.54
CTSA-202ENST00000354880 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.54
CTSA-202ENST00000354880 VGLL1Q99990 258 aa11.71□□□□□ -0.54
CTSA-202ENST00000354880 MLST8Q9BVC4 326 aa11.71□□□□□ -0.54
CTSA-202ENST00000354880 TRRAPQ9Y4A5 3859 aa11.71□□□□□ -0.54
CTSA-202ENST00000354880 A0A087WWC5 75 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 SAP30O75446 220 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 RNF212Q495C1 297 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 FAM24BQ8N5W8 94 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 ZFP30Q9Y2G7 519 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 TRAV2A0A0B4J234 112 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 GCGP01275 180 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 MT-ND4LP03901 98 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 ZNF688P0C7X2 276 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 OR5I1Q13606 314 aa11.7□□□□□ -0.54
CTSA-202ENST00000354880 SFRP2Q96HF1 295 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms