RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 CDC42EP3Q9UKI2 254 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 A0A1W2PS18 150 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 J3QLI3 93 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 KLHDC1Q8N7A1 406 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 NIT2Q9NQR4 276 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 AGRNO00468 2067 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 SETXQ7Z333 2677 aaKnown RBP8.6□□□□□ -1.03
SVIP-201ENST00000354193 CXorf65A6NEN9 183 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 A8MWL6 223 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 ZNF253O75346 499 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 CRISP2P16562 243 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 LCN12Q6JVE5 192 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 AJUBAQ96IF1 538 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 C8orf49Q96NF6 230 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
SVIP-201ENST00000354193 MEGF9Q9H1U4 602 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 UFC1Q9Y3C8 167 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 IGHG2P01859 326 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 MRPL27Q9P0M9 148 aaKnown RBP8.6□□□□□ -1.03
SVIP-201ENST00000354193 TAS2R60P59551 318 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 PSG9Q00887 426 aa8.6□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BKO60814 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BJP06899 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BOP23527 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BBP33778 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BDP58876 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BCP62807 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST2H2BEQ16778 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BHQ93079 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BNQ99877 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H2BMQ99879 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 VGLL1Q99990 258 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 TMEM189A5PLL7 270 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 SPRY2O43597 315 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 SMUG1Q53HV7 270 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
SVIP-201ENST00000354193 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 C12orf57Q99622 126 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 ZNF414Q96IQ9 312 aa8.59□□□□□ -1.03
SVIP-201ENST00000354193 IGHV3OR16-12A0A075B7B8 117 aa8.59□□□□□ -1.04
SVIP-201ENST00000354193 SCGB1D1O95968 90 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 OR10J6PQ8NGY7 276 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 ZNF48Q96MX3 618 aaPredicted RBP8.58□□□□□ -1.04
SVIP-201ENST00000354193 TUBA4BQ9H853 241 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 FAM223BA6NKX1 122 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 PFN1P07737 140 aaKnown RBP8.58□□□□□ -1.04
SVIP-201ENST00000354193 PSMG4Q5JS54 123 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
SVIP-201ENST00000354193 FAM223AQ8IWN6 122 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 PRAC2D3DTV9 90 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 GPX1P07203 203 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 SRIP30626 198 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 OR11H1Q8NG94 326 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 USMG5Q96IX5 58 aa8.58□□□□□ -1.04
SVIP-201ENST00000354193 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
SVIP-201ENST00000354193 BAHCC1Q9P281 2608 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 EDN2P20800 178 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 FXYD7P58549 80 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 LOC389332A0A1B0GUA5 103 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 C9JCJ5 164 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 DEFB104AQ8WTQ1 72 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 SLURP1P55000 103 aa8.57□□□□□ -1.04
SVIP-201ENST00000354193 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
SVIP-201ENST00000354193 DAZ1Q9NQZ3 744 aaKnown RBP8.57□□□□□ -1.04
SVIP-201ENST00000354193 BUB3O43684 328 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 TWIST1Q15672 202 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 TMEM183BQ1AE95 376 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 C18orf65Q6ZTR6 163 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 Q86TA4 180 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 F8W735 103 aaPredicted RBP8.56□□□□□ -1.04
SVIP-201ENST00000354193 HSBP1O75506 76 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 APCSP02743 223 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 TXN2Q99757 166 aa8.56□□□□□ -1.04
SVIP-201ENST00000354193 DIRC3C9JPN6 131 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 AMTP48728 403 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 KRTDAPP60985 99 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 PAFAH1B2P68402 229 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 C11orf52Q96A22 123 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 TMEM208Q9BTX3 173 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 OSTCQ9NRP0 149 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 RNASE4P34096 147 aaKnown RBP8.55□□□□□ -1.04
SVIP-201ENST00000354193 PSG3Q16557 428 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 TRBV24-1A0A075B6N3 115 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 ZC2HC1AQ96GY0 325 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 WI2-2373I1.2A0A1W2PRP0 233 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 M0R381 172 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 LINC00322Q6ZN03 302 aaPredicted RBP8.55□□□□□ -1.04
SVIP-201ENST00000354193 NUP35Q8NFH5 326 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 V9GYV3 84 aa8.55□□□□□ -1.04
SVIP-201ENST00000354193 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 A0A087WW49 117 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 HOXD3P31249 432 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms