RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 HLA-DRB4X5D2U9 266 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 A0A0G2JRQ6 117 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 GFRA3O60609 400 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 NDUFS7O75251 213 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 RNF166Q96A37 237 aaPredicted RBP4.11□□□□□ -1.75
SKP1-202ENST00000353411 C2CD3Q4AC94 2353 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 IGHV3-21A0A0B4J1V1 117 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 FAM90A27PA6NNH2 459 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 K7EMI3 77 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 TM4SF5O14894 197 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 CEACAM4O75871 244 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 RPL39P5Q59GN2 51 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 PVRIGQ6DKI7 326 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 C16orf47Q6ZP98 133 aaPredicted RBP4.11□□□□□ -1.75
SKP1-202ENST00000353411 FAM90A1Q86YD7 464 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 CARD19Q96LW7 228 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 SUMO2P61956 95 aaKnown RBP4.11□□□□□ -1.75
SKP1-202ENST00000353411 Q86TA4 180 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 SPAARA0A1B0GVQ0 90 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 ZNF883P0CG24 379 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
SKP1-202ENST00000353411 SLC25A53Q5H9E4 307 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 FAM214BQ7L5A3 538 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 C1orf147Q96MC9 270 aaPredicted RBP4.11□□□□□ -1.75
SKP1-202ENST00000353411 F8WDY8 70 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 M0R381 172 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 SOCS3O14543 225 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 SS18L1O75177 396 aaPredicted RBP4.11□□□□□ -1.75
SKP1-202ENST00000353411 NCR2O95944 276 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 ARMS2P0C7Q2 107 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 SLC50A1Q9BRV3 221 aa4.11□□□□□ -1.75
SKP1-202ENST00000353411 PIEZO1Q92508 2521 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 F5H768 121 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 RNF152Q8N8N0 203 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 SSC4DQ8WTU2 575 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 TRGV9Q99603 122 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 TMEM243Q9BU79 118 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 ZFHX2Q9C0A1 2572 aaPredicted RBP4.1□□□□□ -1.75
SKP1-202ENST00000353411 UFSP1Q6NVU6 142 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 A0A087WX48 190 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 TMEM42Q69YG0 159 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 C20orf173Q96LM9 149 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 IGKV1-12A0A0C4DH73 117 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 CFC1BP0CG36 223 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 CFC1P0CG37 223 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 SIGLEC15Q6ZMC9 328 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 ACANP16112 2415 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 A0A0B4J2C4 111 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 PRR30Q53SZ7 412 aaPredicted RBP4.1□□□□□ -1.75
SKP1-202ENST00000353411 ACP7Q6ZNF0 438 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 RNF144BQ7Z419 303 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 TMEM141Q96I45 108 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 DUX3Q96PT4 197 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 LINC00527Q9UJ94 153 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 RHODO00212 210 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 CFHR2P36980 270 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 FXYD7P58549 80 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 DYNLRB2Q8TF09 96 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 ACACBO00763 2458 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 TRAV25A0A0B4J276 109 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 H3BT86 120 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 HERVK_113P63121 156 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 Q71RC1 249 aaPredicted RBP4.1□□□□□ -1.75
SKP1-202ENST00000353411 TM2D2Q9BX73 214 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 MRPL35Q9NZE8 188 aaKnown RBP4.1□□□□□ -1.75
SKP1-202ENST00000353411 DKK2Q9UBU2 259 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 HIVEP2P31629 2446 aa4.1□□□□□ -1.75
SKP1-202ENST00000353411 SHISA2Q6UWI4 295 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 IGKV1-27A0A075B6S5 117 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 IQCF6A8MYZ5 107 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 WNT9BO14905 357 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 SLC25A16P16260 332 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 PDE6HQ13956 83 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 A0A1B0GX51 115 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 APELAP0DMC3 54 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 COL4A1P02462 1669 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 UBL5Q9BZL1 73 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 DUSP14O95147 198 aaKnown RBP4.09□□□□□ -1.75
SKP1-202ENST00000353411 CHCHD5Q9BSY4 110 aa4.09□□□□□ -1.75
SKP1-202ENST00000353411 LINC00643Q86TS7 51 aa4.09□□□□□ -1.76
SKP1-202ENST00000353411 RPUSD1Q9UJJ7 312 aaKnown RBP4.09□□□□□ -1.76
SKP1-202ENST00000353411 UBE2L6O14933 153 aa4.09□□□□□ -1.76
SKP1-202ENST00000353411 MRPL51Q4U2R6 128 aaKnown RBP4.09□□□□□ -1.76
SKP1-202ENST00000353411 PIFOQ8TCI5 191 aa4.09□□□□□ -1.76
SKP1-202ENST00000353411 BRK1Q8WUW1 75 aa4.09□□□□□ -1.76
SKP1-202ENST00000353411 ZC2HC1AQ96GY0 325 aa4.09□□□□□ -1.76
SKP1-202ENST00000353411 CRPP02741 224 aa4.09□□□□□ -1.76
SKP1-202ENST00000353411 GATD1Q8NB37 220 aa4.09□□□□□ -1.76
SKP1-202ENST00000353411 SCARF2Q96GP6 870 aaPredicted RBP4.09□□□□□ -1.76
SKP1-202ENST00000353411 CHCHD2Q9Y6H1 151 aaPredicted RBP4.09□□□□□ -1.76
SKP1-202ENST00000353411 C21orf140B9A014 251 aa4.08□□□□□ -1.76
SKP1-202ENST00000353411 CRYGSP22914 178 aa4.08□□□□□ -1.76
SKP1-202ENST00000353411 VCYO14598 125 aa4.08□□□□□ -1.76
SKP1-202ENST00000353411 SH2D1AO60880 128 aa4.08□□□□□ -1.76
SKP1-202ENST00000353411 PEAR1Q5VY43 1037 aaPredicted RBP4.08□□□□□ -1.76
SKP1-202ENST00000353411 TRGV5A0A0B4J1U4 118 aa4.08□□□□□ -1.76
SKP1-202ENST00000353411 LEPROTO15243 131 aa4.08□□□□□ -1.76
SKP1-202ENST00000353411 AGFG2O95081 481 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms