RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 A0A1W2PPR1 153 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 K7EQM0 130 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 TIMD4Q96H15 378 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 PSMG3-AS1Q96PY0 264 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 TPPP3Q9BW30 176 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 CST9LQ9H4G1 147 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 SH2D1AO60880 128 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 C21orf62Q9NYP8 219 aa11.33□□□□□ -0.6
ARHGEF1-202ENST00000347545 TMSB15BA0A087X1C1 80 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 TMEM213A2RRL7 107 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 A0A096LNJ9 63 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 CTSGP08311 255 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 HLA-DMBP28068 263 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 LOXL1Q08397 574 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 EBI3Q14213 229 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 IGFL4Q6B9Z1 124 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 LYZL1Q6UWQ5 148 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 PMCHL2Q9BQD1 86 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 MUC21A0A0G2JKD1 596 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 MUC21A0A140T8X8 626 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 OCIAD2Q56VL3 154 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 MUC21Q5SSG8 566 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 AJUBAQ96IF1 538 aa11.32□□□□□ -0.6
ARHGEF1-202ENST00000347545 IGF2RP11717 2491 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 PRSS47A8MTI9 375 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 SNAI2O43623 268 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 NCR2O95944 276 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 MSRB2Q9Y3D2 182 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 ATRXP46100 2492 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 IGHV3OR16-8A0A075B7F1 116 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 NDUFS7O75251 213 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 RIPPLY3P57055 190 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 COX8CQ7Z4L0 72 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 VGLL1Q99990 258 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
ARHGEF1-202ENST00000347545 FOXE3Q13461 319 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 Q8TAT8 98 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 U3KQK5 164 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 A0A1B0GW15 77 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 TAX1BP3O14907 124 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 Q6AWC8 147 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 RAXQ9Y2V3 346 aa11.3□□□□□ -0.6
ARHGEF1-202ENST00000347545 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 Q8N9W7 124 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 PRR25Q96S07 402 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 D6R8Y8 96 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 C1orf122Q6ZSJ8 110 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 NBASA2RRP1 2371 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 TMEM11P17152 192 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 TCTAP57738 103 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 PSG9Q00887 426 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
ARHGEF1-202ENST00000347545 VPS13CQ709C8 3753 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 CT45A10P0DMU9 189 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 SPTA1P02549 2419 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 A0A087X0K7 114 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 DTX2Q86UW9 622 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
ARHGEF1-202ENST00000347545 SAP30O75446 220 aa11.27□□□□□ -0.6
ARHGEF1-202ENST00000347545 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.6
ARHGEF1-202ENST00000347545 SMIM15Q7Z3B0 74 aa11.27□□□□□ -0.6
ARHGEF1-202ENST00000347545 NAA38Q9BRA0 125 aaKnown RBP11.27□□□□□ -0.6
ARHGEF1-202ENST00000347545 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 RPL7P18124 248 aaKnown RBP11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 CSN1S1P47710 185 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 PAX8Q06710 450 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 KLRB1Q12918 225 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 OOSP1A8MZH6 123 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 RABAC1Q9UI14 185 aa11.27□□□□□ -0.61
ARHGEF1-202ENST00000347545 LOC389332A0A1B0GUA5 103 aa11.26□□□□□ -0.61
ARHGEF1-202ENST00000347545 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
ARHGEF1-202ENST00000347545 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
ARHGEF1-202ENST00000347545 PRAC2D3DTV9 90 aa11.26□□□□□ -0.61
ARHGEF1-202ENST00000347545 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms