RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 UBR5O95071 2799 aaPredicted RBP8.05□□□□□ -1.12
LIMA1-201ENST00000341247 CT45A10P0DMU9 189 aa8.05□□□□□ -1.12
LIMA1-201ENST00000341247 SFTPCP11686 197 aa8.05□□□□□ -1.12
LIMA1-201ENST00000341247 VGLL1Q99990 258 aa8.05□□□□□ -1.12
LIMA1-201ENST00000341247 MCRIP2Q9BUT9 160 aaKnown RBP8.05□□□□□ -1.12
LIMA1-201ENST00000341247 SERTM2A0A1B0GWG4 89 aa8.05□□□□□ -1.12
LIMA1-201ENST00000341247 OOSP1A8MZH6 123 aa8.05□□□□□ -1.12
LIMA1-201ENST00000341247 EBI3Q14213 229 aa8.05□□□□□ -1.12
LIMA1-201ENST00000341247 RELQ04864 619 aaPredicted RBP8.04□□□□□ -1.12
LIMA1-201ENST00000341247 TEX43Q6ZNM6 134 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 TMEM75Q8N9X5 138 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 SNHG12Q9BXW3 62 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 APOHP02749 345 aaPredicted RBP8.04□□□□□ -1.12
LIMA1-201ENST00000341247 RPL7P18124 248 aaKnown RBP8.04□□□□□ -1.12
LIMA1-201ENST00000341247 ERCC8Q13216 396 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 Q8N976 141 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 SMIM12Q96EX1 92 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 CCL19Q99731 98 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 SMAD5-AS1Q9Y6J3 95 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 TENM4Q6N022 2769 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 KIR2DL5BA0A0G2JN68 375 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 KIR2DL5BA0A0G2JPC4 375 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 RASL11AQ6T310 242 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 ATP5L2Q7Z4Y8 100 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 KIR2DL5AQ8N109 375 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 URB1-AS1Q96HZ7 61 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 RNF24Q9Y225 148 aa8.04□□□□□ -1.12
LIMA1-201ENST00000341247 ATP5J2P56134 94 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 EBLN2Q6P2I7 272 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 TMEM213A2RRL7 107 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 IGHV4-38-2P0DP08 117 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 SPATA45Q537H7 98 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 LCNL1Q6ZST4 164 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 ZFP30Q9Y2G7 519 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 A0A1B0GUT8 65 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 PRAC2D3DTV9 90 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 CCDC140Q96MF4 163 aa8.03□□□□□ -1.12
LIMA1-201ENST00000341247 ABCA12Q86UK0 2595 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 FAM181BA6NEQ2 426 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 SH2D1AO60880 128 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 PRB1P04280 392 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 CT83Q5H943 113 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 FAM110DQ8TAY7 271 aaPredicted RBP8.02□□□□□ -1.13
LIMA1-201ENST00000341247 ZNF502Q8TBZ5 544 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.02□□□□□ -1.13
LIMA1-201ENST00000341247 NPIPB6E9PJ23 425 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 PPIFP30405 207 aaKnown RBP8.02□□□□□ -1.13
LIMA1-201ENST00000341247 IGHV4-30-2A0A087WSY4 118 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 LOC102724200A0A096LPH7 203 aaPredicted RBP8.02□□□□□ -1.13
LIMA1-201ENST00000341247 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 TMEM189A5PLL7 270 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 IGHV3-11P01762 117 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 ZNF80P51504 273 aaPredicted RBP8.02□□□□□ -1.13
LIMA1-201ENST00000341247 LYZL1Q6UWQ5 148 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 S100A7AQ86SG5 101 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 LYPD1Q8N2G4 141 aa8.02□□□□□ -1.13
LIMA1-201ENST00000341247 IGKV3-7A0A075B6H7 116 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 OVOL3O00110 214 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 SCGB2A1O75556 95 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 FXYD7P58549 80 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 SPATA12Q7Z6I5 190 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 LINC00469Q8N7U9 141 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 PMCHL2Q9BQD1 86 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 J3KRW8 73 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 PSG9Q00887 426 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 C5orf56Q8N8D9 126 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 MAPK1IP1LQ8NDC0 245 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 OR4B1Q8NGF8 309 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 PIMREGQ9BSJ6 248 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 GFRA4Q9GZZ7 299 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 ZMAT5Q9UDW3 170 aaKnown RBP8.01□□□□□ -1.13
LIMA1-201ENST00000341247 TP73-AS1Q9UF72 201 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 ORM1P02763 201 aa8.01□□□□□ -1.13
LIMA1-201ENST00000341247 KLF5Q13887 457 aaPredicted RBP8.01□□□□□ -1.13
LIMA1-201ENST00000341247 M0R143 59 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 GOSR1O95249 250 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 IGHG4P01861 327 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 PDE6HQ13956 83 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 PRR25Q96S07 402 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 TEX15Q9BXT5 2789 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 PTPN13Q12923 2485 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 TRBV12-3P01733 135 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 RIGQ13278 110 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 LURAP1LQ8IV03 231 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 MIEN1Q9BRT3 115 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 IGHV1-69DA0A0B4J2H0 117 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 IGHV1-24A0A0C4DH33 117 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 IGHV1-69P01742 117 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 TRGV3P03979 118 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 LINC00614P0C842 121 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 G0S2P27469 103 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 Q6ZS46 218 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 AMN1Q8IY45 258 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 ZNF48Q96MX3 618 aaPredicted RBP8□□□□□ -1.13
LIMA1-201ENST00000341247 TXN2Q99757 166 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
LIMA1-201ENST00000341247 SMKR1H3BMG3 65 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 HAX1O00165 279 aa7.99□□□□□ -1.13
LIMA1-201ENST00000341247 BUB3O43684 328 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms