RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
H3F3C-201ENST00000340398 COX7A2P2O60397 106 aa11.3□□□□□ -0.6
H3F3C-201ENST00000340398 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
H3F3C-201ENST00000340398 CXCL2P19875 107 aa11.3□□□□□ -0.6
H3F3C-201ENST00000340398 C4orf46Q504U0 113 aa11.3□□□□□ -0.6
H3F3C-201ENST00000340398 PXDC1Q5TGL8 231 aa11.3□□□□□ -0.6
H3F3C-201ENST00000340398 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
H3F3C-201ENST00000340398 TSC22D2O75157 780 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 RLN2P04090 185 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 IGLC2P0DOY2 106 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 INPP1P49441 399 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 TAS2R30P59541 319 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 ZNF546Q86UE3 836 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 Q8N1X5 172 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 ZNF431Q8TF32 576 aaPredicted RBP11.29□□□□□ -0.6
H3F3C-201ENST00000340398 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
H3F3C-201ENST00000340398 NAP1L6A6NFF2 107 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 BTCP35070 178 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 SPANXN2Q5MJ10 180 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 Q6ZTI0 123 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 ZNF503Q96F45 646 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 SDHCQ99643 169 aaPredicted RBP11.28□□□□□ -0.6
H3F3C-201ENST00000340398 Q9H3A6 140 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 DNAJC4Q9NNZ3 241 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 ZNF586Q9NXT0 402 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 RNF24Q9Y225 148 aa11.28□□□□□ -0.6
H3F3C-201ENST00000340398 CCSO14618 274 aa11.27□□□□□ -0.61
H3F3C-201ENST00000340398 MIC13Q5XKP0 118 aa11.27□□□□□ -0.61
H3F3C-201ENST00000340398 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
H3F3C-201ENST00000340398 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
H3F3C-201ENST00000340398 UPK3BQ9BT76 320 aa11.27□□□□□ -0.61
H3F3C-201ENST00000340398 GGACTQ9BVM4 153 aa11.27□□□□□ -0.61
H3F3C-201ENST00000340398 FUSP35637 526 aaKnown RBP eCLIP11.26□□□□□ -0.61
H3F3C-201ENST00000340398 CAMLGP49069 296 aa11.26□□□□□ -0.61
H3F3C-201ENST00000340398 ERCC8Q13216 396 aa11.26□□□□□ -0.61
H3F3C-201ENST00000340398 TTC32Q5I0X7 151 aa11.26□□□□□ -0.61
H3F3C-201ENST00000340398 NRARPQ7Z6K4 114 aa11.26□□□□□ -0.61
H3F3C-201ENST00000340398 MITD1Q8WV92 249 aa11.26□□□□□ -0.61
H3F3C-201ENST00000340398 GSN-AS1Q9NRJ2 163 aa11.26□□□□□ -0.61
H3F3C-201ENST00000340398 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
H3F3C-201ENST00000340398 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
H3F3C-201ENST00000340398 A0A096LPF7 62 aa11.25□□□□□ -0.61
H3F3C-201ENST00000340398 NPIPB6E9PJ23 425 aa11.25□□□□□ -0.61
H3F3C-201ENST00000340398 CST7O76096 145 aa11.25□□□□□ -0.61
H3F3C-201ENST00000340398 LEPP41159 167 aa11.25□□□□□ -0.61
H3F3C-201ENST00000340398 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
H3F3C-201ENST00000340398 LSM5Q9Y4Y9 91 aaKnown RBP11.25□□□□□ -0.61
H3F3C-201ENST00000340398 FAM24AA6NFZ4 105 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 H3BNG1 76 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 L7N2F9 121 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 M0R3E3 92 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 BCAP31P51572 246 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 VAMP2P63027 116 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 Q6ZRG5 221 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 PYGO2Q9BRQ0 406 aa11.24□□□□□ -0.61
H3F3C-201ENST00000340398 RBM38Q9H0Z9 239 aaKnown RBP11.24□□□□□ -0.61
H3F3C-201ENST00000340398 CD300CQ08708 224 aa11.23□□□□□ -0.61
H3F3C-201ENST00000340398 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
H3F3C-201ENST00000340398 TRGV2A0A075B6R0 118 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 A0A1W2PPQ1 181 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 CENPXA8MT69 81 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 ZNF324O75467 553 aaPredicted RBP11.22□□□□□ -0.61
H3F3C-201ENST00000340398 BTF3P20290 206 aaKnown RBP11.22□□□□□ -0.61
H3F3C-201ENST00000340398 CAV2P51636 162 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 LINC00315P59091 139 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 BTN1A1Q13410 526 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 RAB31Q13636 194 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 GUK1Q16774 197 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 Q6ZQT7 251 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 C11orf1Q9H5F2 150 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
H3F3C-201ENST00000340398 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
H3F3C-201ENST00000340398 C7orf71A4D174 169 aa11.21□□□□□ -0.61
H3F3C-201ENST00000340398 NDUFB4O95168 129 aa11.21□□□□□ -0.61
H3F3C-201ENST00000340398 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.61
H3F3C-201ENST00000340398 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.61
H3F3C-201ENST00000340398 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.61
H3F3C-201ENST00000340398 FUT9Q9Y231 359 aa11.21□□□□□ -0.61
H3F3C-201ENST00000340398 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
H3F3C-201ENST00000340398 TRBV19A0A075B6N1 114 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 C5orf51A6NDU8 294 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 PLA2G10O15496 165 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 IL7P13232 177 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
H3F3C-201ENST00000340398 EXOC3-AS1Q8N2X6 119 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 FAM19A4Q96LR4 140 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 SEC22CQ9BRL7 303 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 SLC39A9Q9NUM3 307 aa11.2□□□□□ -0.62
H3F3C-201ENST00000340398 UQCC1Q9NVA1 299 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms