RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 PSMG4Q5JS54 123 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 LINC00052Q96N35 136 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 C19orf73Q9NVV2 129 aa13.31□□□□□ -0.28
SDCBP2-201ENST00000339987 PGPA6NDG6 321 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 OR11H12B2RN74 326 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 GGTLC3B5MD39 225 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 PAGE4O60829 102 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 TAGLN2P37802 199 aaKnown RBP13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 DEFB131AP59861 70 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 UQCC3Q6UW78 93 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 EIF4E3Q8N5X7 224 aaKnown RBP13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 ZNF738Q8NE65 137 aa13.3□□□□□ -0.28
SDCBP2-201ENST00000339987 M0R3E3 92 aa13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 BCL2P10415 239 aa13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 CST9LP1Q5W188 147 aa13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 C5orf17Q8NAS9 161 aa13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 RXFP4Q8TDU9 374 aa13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 PRR25Q96S07 402 aa13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 TXNDC17Q9BRA2 123 aa13.29□□□□□ -0.28
SDCBP2-201ENST00000339987 MGAM2Q2M2H8 2515 aa13.28□□□□□ -0.28
SDCBP2-201ENST00000339987 CSN1S1P47710 185 aa13.28□□□□□ -0.28
SDCBP2-201ENST00000339987 CCDC28AQ8IWP9 274 aa13.28□□□□□ -0.28
SDCBP2-201ENST00000339987 Q8N1Y9 231 aa13.28□□□□□ -0.28
SDCBP2-201ENST00000339987 TCEAL7Q9BRU2 100 aa13.28□□□□□ -0.28
SDCBP2-201ENST00000339987 ZNF705FA8MVS1 300 aaPredicted RBP13.27□□□□□ -0.29
SDCBP2-201ENST00000339987 SLC25A5P05141 298 aaKnown RBP13.27□□□□□ -0.29
SDCBP2-201ENST00000339987 HAGHQ16775 308 aa13.27□□□□□ -0.29
SDCBP2-201ENST00000339987 FOXI2Q6ZQN5 318 aa13.27□□□□□ -0.29
SDCBP2-201ENST00000339987 CMTM2Q8TAZ6 248 aa13.27□□□□□ -0.29
SDCBP2-201ENST00000339987 VAX2Q9UIW0 290 aa13.27□□□□□ -0.29
SDCBP2-201ENST00000339987 LOC102723971A0A1B0GUV8 181 aa13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 ATP5G3P48201 142 aa13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 MEF2BQ02080 365 aaPredicted RBP13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 APRG1Q8IVJ8 170 aa13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 FAM210AQ96ND0 272 aa13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 SAV1Q9H4B6 383 aaPredicted RBP13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 EPDR1Q9UM22 224 aa13.26□□□□□ -0.29
SDCBP2-201ENST00000339987 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
SDCBP2-201ENST00000339987 KRBOX1C9JBD0 128 aa13.25□□□□□ -0.29
SDCBP2-201ENST00000339987 DIRC3C9JPN6 131 aa13.25□□□□□ -0.29
SDCBP2-201ENST00000339987 PRAC2D3DTV9 90 aa13.25□□□□□ -0.29
SDCBP2-201ENST00000339987 ZNF506Q5JVG8 444 aa13.25□□□□□ -0.29
SDCBP2-201ENST00000339987 EBLN2Q6P2I7 272 aa13.25□□□□□ -0.29
SDCBP2-201ENST00000339987 OR8A1Q8NGG7 326 aa13.25□□□□□ -0.29
SDCBP2-201ENST00000339987 A0A0J9YX75 114 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 SERTM2A0A1B0GWG4 89 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 TCRAP04437 139 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 DEFB1P60022 68 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 PEA15Q15121 130 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 ZNF124Q15973 351 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 WFDC10AQ9H1F0 79 aa13.24□□□□□ -0.29
SDCBP2-201ENST00000339987 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 KNCNA6PVL3 124 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 F6UB75 175 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 NDUFS6O75380 124 aaKnown RBP13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 DUSP14O95147 198 aaKnown RBP13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 HLA-DRB4P13762 266 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 GNG5P63218 68 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 DEFB125Q8N687 156 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 EIF5A2Q9GZV4 153 aaKnown RBP13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 TREM1Q9NP99 234 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 HLA-DRB4X5D2U9 266 aa13.23□□□□□ -0.29
SDCBP2-201ENST00000339987 F6UZH7 168 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 H3BMM0 161 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 PEX7O00628 323 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 TOR2AQ5JU69 321 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 CLUHP3Q96NS8 147 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 RARRES2Q99969 163 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 SMDT1Q9H4I9 107 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 DNAH3Q8TD57 4116 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 A8MTW9 85 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 NPIPB6E9PJ23 425 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 PDE6DO43924 150 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 HIST1H1AQ02539 215 aaPredicted RBP13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 C9orf47Q6ZRZ4 202 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 C11orf52Q96A22 123 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 AURKAIP1Q9NWT8 199 aaPredicted RBP13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 RPH3ALQ9UNE2 315 aa13.22□□□□□ -0.29
SDCBP2-201ENST00000339987 K7EQM0 130 aa13.21□□□□□ -0.3
SDCBP2-201ENST00000339987 PRB4P10163 310 aaPredicted RBP13.21□□□□□ -0.3
SDCBP2-201ENST00000339987 CNN1P51911 297 aaKnown RBP13.21□□□□□ -0.3
SDCBP2-201ENST00000339987 SRD5A3Q9H8P0 318 aa13.21□□□□□ -0.3
SDCBP2-201ENST00000339987 SCO2A0A1W2PP80 73 aa13.2□□□□□ -0.3
SDCBP2-201ENST00000339987 A8MZ25 164 aa13.2□□□□□ -0.3
SDCBP2-201ENST00000339987 ZNF705DP0CH99 300 aaPredicted RBP13.2□□□□□ -0.3
SDCBP2-201ENST00000339987 ZNF705BP0CI00 300 aaPredicted RBP13.2□□□□□ -0.3
SDCBP2-201ENST00000339987 TRPT1Q86TN4 253 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms