RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 TRIQKQ629K1 86 aa16.91■□□□□ 0.3
CDKN3-202ENST00000335183 ZBTB8BQ8NAP8 495 aaPredicted RBP16.91■□□□□ 0.3
CDKN3-202ENST00000335183 ZNF503Q96F45 646 aa16.91■□□□□ 0.3
CDKN3-202ENST00000335183 RCL1Q9Y2P8 373 aaKnown RBP16.91■□□□□ 0.3
CDKN3-202ENST00000335183 ESRGQ1W209 222 aa16.9■□□□□ 0.3
CDKN3-202ENST00000335183 C10orf113Q5VZT2 155 aa16.9■□□□□ 0.3
CDKN3-202ENST00000335183 TMEM37Q8WXS4 190 aa16.9■□□□□ 0.3
CDKN3-202ENST00000335183 MGST2Q99735 147 aa16.9■□□□□ 0.3
CDKN3-202ENST00000335183 Q9H3A6 140 aa16.9■□□□□ 0.3
CDKN3-202ENST00000335183 OPCMLQ14982 345 aa16.89■□□□□ 0.29
CDKN3-202ENST00000335183 BAK1Q16611 211 aa16.89■□□□□ 0.29
CDKN3-202ENST00000335183 PXMP4Q9Y6I8 212 aa16.89■□□□□ 0.29
CDKN3-202ENST00000335183 TRAV12-3A0A0B4J271 114 aa16.88■□□□□ 0.29
CDKN3-202ENST00000335183 Q8N1X5 172 aa16.88■□□□□ 0.29
CDKN3-202ENST00000335183 UPK3BQ9BT76 320 aa16.88■□□□□ 0.29
CDKN3-202ENST00000335183 GGACTQ9BVM4 153 aa16.88■□□□□ 0.29
CDKN3-202ENST00000335183 C7orf66A4D0T2 115 aa16.87■□□□□ 0.29
CDKN3-202ENST00000335183 H3BQ15 152 aa16.87■□□□□ 0.29
CDKN3-202ENST00000335183 CT45A10P0DMU9 189 aa16.87■□□□□ 0.29
CDKN3-202ENST00000335183 IGLC2P0DOY2 106 aa16.87■□□□□ 0.29
CDKN3-202ENST00000335183 LEPP41159 167 aa16.87■□□□□ 0.29
CDKN3-202ENST00000335183 TMPRSS5Q9H3S3 457 aa16.87■□□□□ 0.29
CDKN3-202ENST00000335183 L7N2F9 121 aa16.86■□□□□ 0.29
CDKN3-202ENST00000335183 MBPP02686 304 aaPredicted RBP16.86■□□□□ 0.29
CDKN3-202ENST00000335183 VAMP2P63027 116 aa16.86■□□□□ 0.29
CDKN3-202ENST00000335183 SAT2Q96F10 170 aaPredicted RBP16.86■□□□□ 0.29
CDKN3-202ENST00000335183 SCRT2Q9NQ03 307 aa16.86■□□□□ 0.29
CDKN3-202ENST00000335183 ZNF586Q9NXT0 402 aa16.86■□□□□ 0.29
CDKN3-202ENST00000335183 MRPS16Q9Y3D3 137 aaKnown RBP16.86■□□□□ 0.29
CDKN3-202ENST00000335183 TRAV5A0A0B4J249 113 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 A0A1W2PPQ1 181 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 CAMLGP49069 296 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 KRTAP10-2P60368 255 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 Q6ZRG5 221 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 Q6ZTI0 123 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 ZNF431Q8TF32 576 aaPredicted RBP16.85■□□□□ 0.29
CDKN3-202ENST00000335183 PYGO2Q9BRQ0 406 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 DNAJC4Q9NNZ3 241 aa16.85■□□□□ 0.29
CDKN3-202ENST00000335183 CENPXA8MT69 81 aa16.84■□□□□ 0.29
CDKN3-202ENST00000335183 H3BNG1 76 aa16.84■□□□□ 0.29
CDKN3-202ENST00000335183 BTCP35070 178 aa16.84■□□□□ 0.29
CDKN3-202ENST00000335183 MIC13Q5XKP0 118 aa16.84■□□□□ 0.29
CDKN3-202ENST00000335183 ODF3Q96PU9 254 aa16.84■□□□□ 0.29
CDKN3-202ENST00000335183 NPIPB6E9PJ23 425 aa16.83■□□□□ 0.28
CDKN3-202ENST00000335183 CCSO14618 274 aa16.83■□□□□ 0.28
CDKN3-202ENST00000335183 BCAP31P51572 246 aa16.83■□□□□ 0.28
CDKN3-202ENST00000335183 RAB31Q13636 194 aa16.83■□□□□ 0.28
CDKN3-202ENST00000335183 NRARPQ7Z6K4 114 aa16.83■□□□□ 0.28
CDKN3-202ENST00000335183 MITD1Q8WV92 249 aa16.83■□□□□ 0.28
CDKN3-202ENST00000335183 LSM5Q9Y4Y9 91 aaKnown RBP16.83■□□□□ 0.28
CDKN3-202ENST00000335183 BTF3P20290 206 aaKnown RBP16.82■□□□□ 0.28
CDKN3-202ENST00000335183 DAZ2Q13117 558 aaKnown RBP16.82■□□□□ 0.28
CDKN3-202ENST00000335183 GUK1Q16774 197 aa16.82■□□□□ 0.28
CDKN3-202ENST00000335183 TRGV2A0A075B6R0 118 aa16.81■□□□□ 0.28
CDKN3-202ENST00000335183 ZNF846Q147U1 533 aa16.81■□□□□ 0.28
CDKN3-202ENST00000335183 OR1L4Q8NGR5 311 aa16.81■□□□□ 0.28
CDKN3-202ENST00000335183 GSN-AS1Q9NRJ2 163 aa16.81■□□□□ 0.28
CDKN3-202ENST00000335183 APOBP04114 4563 aaKnown RBP16.8■□□□□ 0.28
CDKN3-202ENST00000335183 A0A096LPF7 62 aa16.8■□□□□ 0.28
CDKN3-202ENST00000335183 CST7O76096 145 aa16.8■□□□□ 0.28
CDKN3-202ENST00000335183 CAV2P51636 162 aa16.8■□□□□ 0.28
CDKN3-202ENST00000335183 VSIG2Q96IQ7 327 aa16.8■□□□□ 0.28
CDKN3-202ENST00000335183 FAM25EA8MYX2 175 aa16.79■□□□□ 0.28
CDKN3-202ENST00000335183 SLC25A5P05141 298 aaKnown RBP16.79■□□□□ 0.28
CDKN3-202ENST00000335183 ERCC8Q13216 396 aa16.79■□□□□ 0.28
CDKN3-202ENST00000335183 ZNF680Q8NEM1 530 aa16.79■□□□□ 0.28
CDKN3-202ENST00000335183 PFDN5Q99471 154 aa16.79■□□□□ 0.28
CDKN3-202ENST00000335183 SDHCQ99643 169 aaPredicted RBP16.79■□□□□ 0.28
CDKN3-202ENST00000335183 DNAH5Q8TE73 4624 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 TRGV1A0A0A0MS02 117 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 C7orf71A4D174 169 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 FAM24AA6NFZ4 105 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 M0R3E3 92 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 LINC00315P59091 139 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 UQCC1Q9NVA1 299 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 WDR83OSQ9Y284 106 aa16.78■□□□□ 0.28
CDKN3-202ENST00000335183 C11orf72Q8NBR9 251 aa16.77■□□□□ 0.28
CDKN3-202ENST00000335183 C20orf85Q9H1P6 137 aa16.77■□□□□ 0.28
CDKN3-202ENST00000335183 FUT9Q9Y231 359 aa16.77■□□□□ 0.28
CDKN3-202ENST00000335183 UBE2L5PA0A1B0GUS4 154 aa16.76■□□□□ 0.27
CDKN3-202ENST00000335183 ZNF253O75346 499 aa16.76■□□□□ 0.27
CDKN3-202ENST00000335183 BAXQ07812 192 aa16.76■□□□□ 0.27
CDKN3-202ENST00000335183 BTN1A1Q13410 526 aa16.76■□□□□ 0.27
CDKN3-202ENST00000335183 MRPL53Q96EL3 112 aaKnown RBP16.76■□□□□ 0.27
CDKN3-202ENST00000335183 SLC39A9Q9NUM3 307 aa16.76■□□□□ 0.27
CDKN3-202ENST00000335183 TRBV19A0A075B6N1 114 aa16.75■□□□□ 0.27
CDKN3-202ENST00000335183 C5orf51A6NDU8 294 aa16.75■□□□□ 0.27
CDKN3-202ENST00000335183 IL7P13232 177 aa16.75■□□□□ 0.27
CDKN3-202ENST00000335183 CD300CQ08708 224 aa16.75■□□□□ 0.27
CDKN3-202ENST00000335183 CNPY1Q3B7I2 92 aa16.75■□□□□ 0.27
CDKN3-202ENST00000335183 C12orf45Q8N5I9 185 aaPredicted RBP16.75■□□□□ 0.27
CDKN3-202ENST00000335183 EIF4E3Q8N5X7 224 aaKnown RBP16.75■□□□□ 0.27
CDKN3-202ENST00000335183 SIVA1O15304 175 aa16.74■□□□□ 0.27
CDKN3-202ENST00000335183 RNASE4P34096 147 aaKnown RBP16.74■□□□□ 0.27
CDKN3-202ENST00000335183 RPL29P47914 159 aaKnown RBP16.74■□□□□ 0.27
CDKN3-202ENST00000335183 C18orf15Q96N68 181 aa16.74■□□□□ 0.27
CDKN3-202ENST00000335183 KLF12Q9Y4X4 402 aa16.74■□□□□ 0.27
CDKN3-202ENST00000335183 TIMM9Q9Y5J7 89 aa16.74■□□□□ 0.27
CDKN3-202ENST00000335183 KLLNB2CW77 178 aa16.73■□□□□ 0.27
CDKN3-202ENST00000335183 PVALBP20472 110 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms