RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RELQ04864 619 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-201ENST00000334859 LINC00173Q6ZV60 143 aa13.79□□□□□ -0.2
LRCH3-201ENST00000334859 Q8TAT8 98 aa13.79□□□□□ -0.2
LRCH3-201ENST00000334859 FAM110DQ8TAY7 271 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-201ENST00000334859 TRAV9-2A0A087WT02 112 aa13.79□□□□□ -0.2
LRCH3-201ENST00000334859 AJUBAQ96IF1 538 aa13.79□□□□□ -0.2
LRCH3-201ENST00000334859 A0A1B0GW15 77 aa13.78□□□□□ -0.2
LRCH3-201ENST00000334859 TMEM189A5PLL7 270 aa13.78□□□□□ -0.2
LRCH3-201ENST00000334859 TIMM8BQ9Y5J9 83 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-201ENST00000334859 SPTAN1Q13813 2472 aaKnown RBP13.78□□□□□ -0.2
LRCH3-201ENST00000334859 LMO4P61968 165 aa13.78□□□□□ -0.2
LRCH3-201ENST00000334859 ZNF502Q8TBZ5 544 aa13.78□□□□□ -0.2
LRCH3-201ENST00000334859 ITLN2Q8WWU7 325 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-201ENST00000334859 SMAD5-AS1Q9Y6J3 95 aa13.78□□□□□ -0.2
LRCH3-201ENST00000334859 HLA-DMBP28068 263 aa13.77□□□□□ -0.21
LRCH3-201ENST00000334859 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 SAPCD1Q5SSQ6 148 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 LYZL1Q6UWQ5 148 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 PRR25Q96S07 402 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 VGLL1Q99990 258 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 G3V318 75 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 SYS1-DBNDD2H3BUS1 97 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 CLEC3BP05452 202 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 S100A7P31151 101 aa13.76□□□□□ -0.21
LRCH3-201ENST00000334859 MUC21A0A0G2JKD1 596 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 MUC21A0A140T8X8 626 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 OR4C46A6NHA9 309 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 NPFFO15130 113 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 ZNF25P17030 456 aaPredicted RBP13.75□□□□□ -0.21
LRCH3-201ENST00000334859 MUC21Q5SSG8 566 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 C20orf202A1L168 122 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 TMEM213A2RRL7 107 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 H0Y8G0 127 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 SFTPCP11686 197 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 IGLL1P15814 213 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 GATD1Q8NB37 220 aa13.75□□□□□ -0.21
LRCH3-201ENST00000334859 IGHV3-66A0A0C4DH42 116 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 GNLYP22749 145 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 CLEC19AQ6UXS0 136 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 AP5S1Q9NUS5 200 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 LINC01548A6NM66 108 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 CRXO43186 299 aaPredicted RBP13.74□□□□□ -0.21
LRCH3-201ENST00000334859 OR5AL1P0C617 328 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 COL5A1-AS1Q5SY13 56 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 ZFAND3Q9H8U3 227 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
LRCH3-201ENST00000334859 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 CENPVL3A0A0U1RRI6 287 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 IGHG4P01861 327 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 TSPOP30536 169 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 TFPI2P48307 235 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 FA2HQ7L5A8 372 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 CCDC140Q96MF4 163 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 MAP1LC3CQ9BXW4 147 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 IGHV3OR16-13A0A075B7E8 117 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 IGHV3-74A0A0B4J1X5 117 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 FBLL1A6NHQ2 334 aaKnown RBP13.73□□□□□ -0.21
LRCH3-201ENST00000334859 GOSR1O95249 250 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 TMEM219Q86XT9 240 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 ARL6IP6Q8N6S5 226 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 PRSS3P2Q8NHM4 247 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 HSPB8Q9UJY1 196 aa13.73□□□□□ -0.21
LRCH3-201ENST00000334859 ZNF80P51504 273 aaPredicted RBP13.72□□□□□ -0.21
LRCH3-201ENST00000334859 ZNF493Q6ZR52 646 aa13.72□□□□□ -0.21
LRCH3-201ENST00000334859 PRORYQ9H606 182 aa13.72□□□□□ -0.21
LRCH3-201ENST00000334859 D6R8Y8 96 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 AMN1Q8IY45 258 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 RNF182Q8N6D2 247 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 BUB3O43684 328 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 IGHV4-39P01824 125 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 BMI1P35226 326 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 COX8CQ7Z4L0 72 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 EEF1AKMT3Q96AZ1 226 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 TMEM191AQ9H0A3 160 aa13.71□□□□□ -0.21
LRCH3-201ENST00000334859 ABCA2Q9BZC7 2435 aa13.71□□□□□ -0.22
LRCH3-201ENST00000334859 CELSR1Q9NYQ6 3014 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 IGHV3-49A0A0A0MS15 119 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 RAB9AP51151 201 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 ERCC8Q13216 396 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 DMRTA1Q5VZB9 504 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 C5orf56Q8N8D9 126 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 FER1L6-AS1Q8NA97 138 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 MCRIP2Q9BUT9 160 aaKnown RBP13.7□□□□□ -0.22
LRCH3-201ENST00000334859 COL12A1Q99715 3063 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 LOC389332A0A1B0GUA5 103 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 hDV102S1A0JD36 115 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 PRAC2D3DTV9 90 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 ORM1P02763 201 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 TMEM208Q9BTX3 173 aa13.7□□□□□ -0.22
LRCH3-201ENST00000334859 ZNF207O43670 478 aaKnown RBP13.69□□□□□ -0.22
LRCH3-201ENST00000334859 TWIST1Q15672 202 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 FAM104BQ5XKR9 115 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 STPG4Q8N801 248 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 PRELID3AQ96N28 172 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 CLPSL1A2RUU4 121 aa13.69□□□□□ -0.22
LRCH3-201ENST00000334859 IFI27P40305 119 aaPredicted RBP13.69□□□□□ -0.22
LRCH3-201ENST00000334859 HINT1P49773 126 aaPredicted RBP13.69□□□□□ -0.22
LRCH3-201ENST00000334859 RPS20P60866 119 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms