RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 NEGR1Q7Z3B1 354 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 SIGLEC8Q9NYZ4 499 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 GATA4P43694 442 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 AMN1Q8IY45 258 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 BOD1L2Q8IYS8 172 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
SYNE3-201ENST00000334258 LINC00574Q9H8X3 128 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 DSCAML1Q8TD84 2053 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 GAGE12HA6NDE8 117 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 C17orf77Q96MU5 243 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 C18orf15Q96N68 181 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 HIF1ANQ9NWT6 349 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 PKD1L2Q7Z442 2459 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 A0A1B0GW15 77 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 TMEM213A2RRL7 107 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 IGLV2-23P01705 113 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 C22orf34Q6ZV56 151 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 RASL11BQ9BPW5 248 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 DKK4Q9UBT3 224 aa10.9□□□□□ -0.66
SYNE3-201ENST00000334258 A0A1W2PPM0 123 aa10.9□□□□□ -0.67
SYNE3-201ENST00000334258 BRI3O95415 125 aa10.9□□□□□ -0.67
SYNE3-201ENST00000334258 IGLV2-11P01706 119 aa10.9□□□□□ -0.67
SYNE3-201ENST00000334258 PRB3Q04118 309 aaPredicted RBP10.9□□□□□ -0.67
SYNE3-201ENST00000334258 OR4X2Q8NGF9 303 aa10.9□□□□□ -0.67
SYNE3-201ENST00000334258 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.67
SYNE3-201ENST00000334258 PSG3Q16557 428 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 TIMM23BQ5SRD1 257 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 ORMDL3Q8N138 153 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 CCL17Q92583 94 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 NPFFR1Q9GZQ6 430 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 IGLV3-9A0A075B6K5 115 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 J3KRW8 73 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 M0R3E3 92 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 CRYGCP07315 174 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 SEM1Q6ZVN7 128 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 CRYBG3Q68DQ2 2970 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 HBDP02042 147 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 LGALS9BQ3B8N2 356 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 LGALS9CQ6DKI2 356 aa10.89□□□□□ -0.67
SYNE3-201ENST00000334258 ANKHD1Q8IWZ3 2542 aaKnown RBP10.88□□□□□ -0.67
SYNE3-201ENST00000334258 SMKR1H3BMG3 65 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 CNTFRP26992 372 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 CKS2P33552 79 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 ZNF474Q6S9Z5 364 aaPredicted RBP10.88□□□□□ -0.67
SYNE3-201ENST00000334258 SRSF8Q9BRL6 282 aaKnown RBP10.88□□□□□ -0.67
SYNE3-201ENST00000334258 A0A096LNJ9 63 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 FAM27E3Q08E93 113 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 TMEM133Q9H2Q1 129 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
SYNE3-201ENST00000334258 UTP20O75691 2785 aaKnown RBP10.88□□□□□ -0.67
SYNE3-201ENST00000334258 WNK2Q9Y3S1 2297 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 NDUFB3O43676 98 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 PLGLAQ15195 96 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 FAM169BQ8N8A8 192 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 DKK2Q9UBU2 259 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 TMEM189A5PLL7 270 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 DPF1Q92782 380 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 ZNF785A8K8V0 405 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 ADAMTSL5Q6ZMM2 481 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 BCL6BQ8N143 479 aaPredicted RBP10.87□□□□□ -0.67
SYNE3-201ENST00000334258 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
SYNE3-201ENST00000334258 DLX1P56177 255 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 Q6AWC8 147 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 MRAP2Q96G30 205 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 C8orf49Q96NF6 230 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 TTTY13Q9BZ97 58 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.86□□□□□ -0.67
SYNE3-201ENST00000334258 PRSS1P07477 247 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 CRIP1P50238 77 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 TWIST1Q15672 202 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 FAM104BQ5XKR9 115 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 RAXQ9Y2V3 346 aa10.86□□□□□ -0.67
SYNE3-201ENST00000334258 TRBV19A0A075B6N1 114 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 CD300EQ496F6 205 aaPredicted RBP10.85□□□□□ -0.67
SYNE3-201ENST00000334258 VPS13CQ709C8 3753 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 TRBV7-9A0A0J9YWB2 115 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 SIVA1O15304 175 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 FCGR2BP31994 310 aaPredicted RBP10.85□□□□□ -0.67
SYNE3-201ENST00000334258 ATP5G2Q06055 141 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 SMIM20Q8N5G0 67 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 FAM215AQ9Y5M1 114 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 CFAP46Q8IYW2 2715 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 MYO18BQ8IUG5 2567 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 K7ERJ3 54 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 MRPL51Q4U2R6 128 aaKnown RBP10.85□□□□□ -0.67
SYNE3-201ENST00000334258 TEX36Q5VZQ5 186 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 S4R3C0 116 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 FLNCQ14315 2725 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 EPG5Q9HCE0 2579 aa10.85□□□□□ -0.67
SYNE3-201ENST00000334258 IGFL2Q6UWQ7 119 aa10.84□□□□□ -0.67
SYNE3-201ENST00000334258 TMEM75Q8N9X5 138 aa10.84□□□□□ -0.67
SYNE3-201ENST00000334258 FBXL15Q9H469 300 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms