RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 KLF17Q5JT82 389 aaPredicted RBP14.4□□□□□ -0.1
SOCS3-201ENST00000330871 SRSF8Q9BRL6 282 aaKnown RBP14.4□□□□□ -0.1
SOCS3-201ENST00000330871 TMEM8BA6NDV4 472 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 PTH2Q96A98 100 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 C1QTNF4Q9BXJ3 329 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 ZMAT4Q9H898 229 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 ZNF71Q9NQZ8 489 aaPredicted RBP14.39□□□□□ -0.11
SOCS3-201ENST00000330871 RP1L1Q8IWN7 2480 aaPredicted RBP14.39□□□□□ -0.11
SOCS3-201ENST00000330871 TRAV40A0A0B4J280 105 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 A0A1W2PPI3 338 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 KLRD1Q13241 179 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 C8orf46Q8TAG6 207 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 PIFOQ8TCI5 191 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 ARRDC1-AS1Q9H2J1 176 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 PGPEP1Q9NXJ5 209 aa14.39□□□□□ -0.11
SOCS3-201ENST00000330871 OR11H12B2RN74 326 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 SPRY3O43610 288 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 DIAPH2-AS1Q14236 149 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 SHISA2Q6UWI4 295 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 OR11H1Q8NG94 326 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 OR11H2Q8NH07 326 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 LINC01548A6NM66 108 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 ANAPC13Q9BS18 74 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 RPUSD1Q9UJJ7 312 aaKnown RBP14.38□□□□□ -0.11
SOCS3-201ENST00000330871 HIGD1AQ9Y241 93 aa14.38□□□□□ -0.11
SOCS3-201ENST00000330871 TACC2O95359 2948 aa14.37□□□□□ -0.11
SOCS3-201ENST00000330871 B5MCH6 92 aa14.37□□□□□ -0.11
SOCS3-201ENST00000330871 M0R3E3 92 aa14.37□□□□□ -0.11
SOCS3-201ENST00000330871 HOXB4P17483 251 aaPredicted RBP14.37□□□□□ -0.11
SOCS3-201ENST00000330871 RITA1Q96K30 269 aa14.37□□□□□ -0.11
SOCS3-201ENST00000330871 SLC25A15Q9Y619 301 aa14.37□□□□□ -0.11
SOCS3-201ENST00000330871 EVI2AP22794 236 aa14.37□□□□□ -0.11
SOCS3-201ENST00000330871 TWIST1Q15672 202 aa14.37□□□□□ -0.11
SOCS3-201ENST00000330871 Q6AWC8 147 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 TRGV9Q99603 122 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 LINC00574Q9H8X3 128 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 PROCRQ9UNN8 238 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 FAM216BQ8N7L0 139 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 CCL13Q99616 98 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 SLC25A39Q9BZJ4 359 aaPredicted RBP14.36□□□□□ -0.11
SOCS3-201ENST00000330871 RNF7Q9UBF6 113 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 ZDBF2Q9HCK1 2354 aa14.36□□□□□ -0.11
SOCS3-201ENST00000330871 PRSS29PA6NIE9 313 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 DPM2O94777 84 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 TMEM30BQ3MIR4 351 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 ANXA2RQ3ZCQ2 193 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 TMEM167AQ8TBQ9 72 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 MSRB1Q9NZV6 116 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 RALYQ9UKM9 306 aaKnown RBP14.35□□□□□ -0.11
SOCS3-201ENST00000330871 UFC1Q9Y3C8 167 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 TM4SF5O14894 197 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 GLRXP35754 106 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 SRSF1Q07955 248 aaKnown RBP eCLIP14.35□□□□□ -0.11
SOCS3-201ENST00000330871 CFAP126Q5VTH2 177 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 MRPL35Q9NZE8 188 aaKnown RBP14.35□□□□□ -0.11
SOCS3-201ENST00000330871 DKK4Q9UBT3 224 aa14.35□□□□□ -0.11
SOCS3-201ENST00000330871 CACNA1GO43497 2377 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 INS-IGF2F8WCM5 200 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 GATA4P43694 442 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 MORN3Q6PF18 240 aaPredicted RBP14.34□□□□□ -0.11
SOCS3-201ENST00000330871 TMEM75Q8N9X5 138 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 TMEM133Q9H2Q1 129 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 DMXL1Q9Y485 3027 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 A6NJY4 79 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 FAM90A27PA6NNH2 459 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 CD59P13987 128 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 GAFA1Q96PS6 74 aa14.34□□□□□ -0.11
SOCS3-201ENST00000330871 GATA1P15976 413 aaPredicted RBP14.33□□□□□ -0.12
SOCS3-201ENST00000330871 OR10X1Q8NGY0 326 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 TMEM158Q8WZ71 300 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 VSTM5A8MXK1 200 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 M0R1B8 84 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 RBP4P02753 201 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 CRYGCP07315 174 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 ZNF833PQ6ZTB9 187 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 MAP1LC3AQ9H492 121 aa14.33□□□□□ -0.12
SOCS3-201ENST00000330871 ROS1P08922 2347 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 SH2D1AO60880 128 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 PSMB2P49721 201 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 GAGE5Q13069 117 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 GAGE6Q13070 117 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 SHISA9B4DS77 424 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 CCL11P51671 97 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 NCOR1O75376 2440 aa14.32□□□□□ -0.12
SOCS3-201ENST00000330871 IGLV3-9A0A075B6K5 115 aa14.31□□□□□ -0.12
SOCS3-201ENST00000330871 NDUFA3O95167 84 aa14.31□□□□□ -0.12
SOCS3-201ENST00000330871 OR4C13Q8NGP0 309 aa14.31□□□□□ -0.12
SOCS3-201ENST00000330871 CARD19Q96LW7 228 aa14.31□□□□□ -0.12
SOCS3-201ENST00000330871 TRBV19A0A075B6N1 114 aa14.31□□□□□ -0.12
SOCS3-201ENST00000330871 LOC107984156A0A0G2JMH3 177 aa14.31□□□□□ -0.12
SOCS3-201ENST00000330871 SRSF6Q13247 344 aaKnown RBP14.31□□□□□ -0.12
SOCS3-201ENST00000330871 ARL17AQ8IVW1 177 aa14.31□□□□□ -0.12
SOCS3-201ENST00000330871 TRBV7-3A0A075B6L6 115 aa14.3□□□□□ -0.12
SOCS3-201ENST00000330871 IGHV3-72A0A0B4J1Y9 119 aa14.3□□□□□ -0.12
SOCS3-201ENST00000330871 IGLV2-23P01705 113 aa14.3□□□□□ -0.12
SOCS3-201ENST00000330871 SIGLEC15Q6ZMC9 328 aa14.3□□□□□ -0.12
SOCS3-201ENST00000330871 ZFP2Q6ZN57 461 aa14.3□□□□□ -0.12
SOCS3-201ENST00000330871 RAI1Q7Z5J4 1906 aaPredicted RBP14.3□□□□□ -0.12
SOCS3-201ENST00000330871 HOXA3O43365 443 aaPredicted RBP14.3□□□□□ -0.12
SOCS3-201ENST00000330871 CCL3L1P16619 93 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms