RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 GATD1Q8NB37 220 aa8.73□□□□□ -1.01
SNRNP200-201ENST00000323853 MSMBP08118 114 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 SLAQ13239 276 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 MRPL51Q4U2R6 128 aaKnown RBP8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 RNF166Q96A37 237 aaPredicted RBP8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 LEPROTO15243 131 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 KRTAP27-1Q3LI81 207 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 UBE2E2Q96LR5 201 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 IGHV2-5P01817 119 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 FXYD5Q96DB9 178 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 WT1-ASQ06250 92 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 C8orf86Q6ZUL3 223 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 TP53TG1Q9Y2A0 90 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 LINC01619G3V211 115 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 GATA3P23771 443 aa8.72□□□□□ -1.01
SNRNP200-201ENST00000323853 FREM3P0C091 2139 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 IGLV3-9A0A075B6K5 115 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 DIAPH2-AS1Q14236 149 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 C2orf82Q6UX34 121 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 SPXQ9BT56 116 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 IL15RAQ13261 267 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 ZFAND6Q6FIF0 208 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 PLXNB3Q9ULL4 1909 aa8.71□□□□□ -1.01
SNRNP200-201ENST00000323853 ABCA7Q8IZY2 2146 aa8.71□□□□□ -1.02
SNRNP200-201ENST00000323853 LY6G5BQ8NDX9 201 aa8.71□□□□□ -1.02
SNRNP200-201ENST00000323853 C1QTNF4Q9BXJ3 329 aa8.71□□□□□ -1.02
SNRNP200-201ENST00000323853 PAX4O43316 350 aa8.71□□□□□ -1.02
SNRNP200-201ENST00000323853 MMP23AO75900 390 aa8.71□□□□□ -1.02
SNRNP200-201ENST00000323853 LYPD6BQ8NI32 183 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 ZC2HC1AQ96GY0 325 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 PLXND1Q9Y4D7 1925 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 TRAV26-2A0A0B4J265 109 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 G3V318 75 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 K7EN84 100 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 C11orf52Q96A22 123 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 VWC2Q2TAL6 325 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 I3L3M4 83 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 NDUFA4O00483 81 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 LTAP01374 205 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 LGALS1P09382 135 aaKnown RBP8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 DEFB131AP59861 70 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 FAM120AOSQ5T036 256 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 KLK9Q9UKQ9 250 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 PRR25Q96S07 402 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
SNRNP200-201ENST00000323853 IGHV2-70P01814 119 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 ADAMTSL5Q6ZMM2 481 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 C1orf159Q96HA4 380 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 FAM215AQ9Y5M1 114 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 HEATR5BQ9P2D3 2071 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 A0A087WX48 190 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 C8orf31Q8N9H6 132 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 TRAV13-1A0A0B4J241 112 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 ARID1AO14497 2285 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 GAGE12BA1L429 117 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 ASPHD1Q5U4P2 390 aa8.69□□□□□ -1.02
SNRNP200-201ENST00000323853 KIF26BQ2KJY2 2108 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 Q8NFD4 153 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 SS18Q15532 418 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 PRR20EP86478 221 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 PRR20CP86479 221 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 PRR20DP86480 221 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 PRR20BP86481 221 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 PRR20AP86496 221 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 ANXA2RQ3ZCQ2 193 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 C11orf53Q8IXP5 236 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 K7EM74 188 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 C2orf66Q6UXQ4 117 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 GAGE2BQ13066 116 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 PMVKQ15126 192 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 JPT2Q9H910 190 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 SIGLEC8Q9NYZ4 499 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 POU2AF1Q16633 256 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
SNRNP200-201ENST00000323853 TRAV8-3A0A0A6YYJ7 113 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 SP5Q6BEB4 398 aaPredicted RBP8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 IGLC1P0CG04 106 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 Q5PR19 223 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 TP53BP1Q12888 1972 aaPredicted RBP8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 IGHV1OR15-1A0A075B7D0 117 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 IGLC2P0DOY2 106 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 C6orf226Q5I0X4 101 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 FGF23Q9GZV9 251 aaPredicted RBP8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 MDC1Q14676 2089 aaKnown RBP8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 C9orf118A6NHY6 69 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 KNL1Q8NG31 2342 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 NEGR1Q7Z3B1 354 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 RNF138Q8WVD3 245 aa8.67□□□□□ -1.02
SNRNP200-201ENST00000323853 PRSS57Q6UWY2 283 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 COX8AP10176 69 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 Q6ZSR3 168 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms