RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 C22orf46C9J442 243 aa13.2□□□□□ -0.3
CLIP4-201ENST00000320081 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.2□□□□□ -0.3
CLIP4-201ENST00000320081 C22orf34Q6ZV56 151 aa13.2□□□□□ -0.3
CLIP4-201ENST00000320081 SYT8Q8NBV8 401 aa13.2□□□□□ -0.3
CLIP4-201ENST00000320081 DUX3Q96PT4 197 aa13.2□□□□□ -0.3
CLIP4-201ENST00000320081 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 ATP6V0E1O15342 81 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 CEACAM8P31997 349 aaPredicted RBP13.19□□□□□ -0.3
CLIP4-201ENST00000320081 GUSBP1Q15486 140 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 TDRG1Q3Y452 100 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 Q8TCH9 128 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
CLIP4-201ENST00000320081 SPCS1Q9Y6A9 102 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 V9GYV3 84 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 FREM2Q5SZK8 3169 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 E7EUB6 86 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 OVOL3O00110 214 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 RRN3P1Q2M238 152 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 SEM1Q6ZVN7 128 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 TNFRSF14Q92956 283 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 SLC25A2Q9BXI2 301 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 CELSR3Q9NYQ7 3312 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 KIAA1549LQ6ZVL6 1849 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 TDGF1P3P51864 188 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 TTC9CQ8N5M4 171 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 LYPD6BQ8NI32 183 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 NPFFR1Q9GZQ6 430 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
CLIP4-201ENST00000320081 TRAV12-3A0A0B4J271 114 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 A0A0G2JLM5 398 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 RNASE1P07998 156 aaKnown RBP13.19□□□□□ -0.3
CLIP4-201ENST00000320081 SUMO2P61956 95 aaKnown RBP13.19□□□□□ -0.3
CLIP4-201ENST00000320081 LINC00477Q96M19 166 aa13.19□□□□□ -0.3
CLIP4-201ENST00000320081 EFNA4P52798 201 aa13.18□□□□□ -0.3
CLIP4-201ENST00000320081 Q86TA4 180 aa13.18□□□□□ -0.3
CLIP4-201ENST00000320081 GEMIN7Q9H840 131 aaKnown RBP13.18□□□□□ -0.3
CLIP4-201ENST00000320081 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
CLIP4-201ENST00000320081 SIGLEC15Q6ZMC9 328 aa13.18□□□□□ -0.3
CLIP4-201ENST00000320081 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
CLIP4-201ENST00000320081 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
CLIP4-201ENST00000320081 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
CLIP4-201ENST00000320081 SOX21Q9Y651 276 aaPredicted RBP13.18□□□□□ -0.3
CLIP4-201ENST00000320081 MAP1AP78559 2803 aaPredicted RBP13.18□□□□□ -0.3
CLIP4-201ENST00000320081 A0A087WWL8 130 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 SMIM13P0DJ93 91 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 SMIM12Q96EX1 92 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 C3orf36Q3SXR2 165 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 PROP1O75360 226 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 PRTN3P24158 256 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 GATA4P43694 442 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 Q6AWC8 147 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 RAX2Q96IS3 184 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 LINC01587Q99440 93 aa13.17□□□□□ -0.3
CLIP4-201ENST00000320081 K7ENP7 123 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 SYS1-DBNDD2H3BUS1 97 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 PSG3Q16557 428 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 PRSS33Q8NF86 280 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 IGKV1OR2-108A0A075B7D4 117 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 ZNF106Q9H2Y7 1883 aaKnown RBP13.16□□□□□ -0.3
CLIP4-201ENST00000320081 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
CLIP4-201ENST00000320081 NPFFO15130 113 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 MRPL36Q9P0J6 103 aaKnown RBP13.15□□□□□ -0.3
CLIP4-201ENST00000320081 A0A1B0GWB2 263 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 PRR20EP86478 221 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 PRR20CP86479 221 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 PRR20DP86480 221 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 PRR20BP86481 221 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 PRR20AP86496 221 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 PRSS57Q6UWY2 283 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 ZNF833PQ6ZTB9 187 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 TNFRSF18Q9Y5U5 241 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 HCFC1P51610 2035 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 TRAV26-2A0A0B4J265 109 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 ATP5LO75964 103 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 NPC2P61916 151 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 MTURNQ8N3F0 131 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
CLIP4-201ENST00000320081 C19orf54Q5BKX5 351 aa13.14□□□□□ -0.31
CLIP4-201ENST00000320081 ZC2HC1BQ5TFG8 222 aa13.14□□□□□ -0.31
CLIP4-201ENST00000320081 FLNBO75369 2602 aaKnown RBP13.14□□□□□ -0.31
CLIP4-201ENST00000320081 KNCNA6PVL3 124 aa13.14□□□□□ -0.31
CLIP4-201ENST00000320081 TDGF1P13385 188 aa13.14□□□□□ -0.31
CLIP4-201ENST00000320081 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
CLIP4-201ENST00000320081 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
CLIP4-201ENST00000320081 PRRC2AP48634 2157 aaKnown RBP13.14□□□□□ -0.31
CLIP4-201ENST00000320081 TOMM40O96008 361 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 TMEM158Q8WZ71 300 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 VCANP13611 3396 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 HTN3P15516 51 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 LYRM7Q5U5X0 104 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 ZNF562Q6V9R5 426 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 PIP4P1Q86T03 277 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 TMEM238LA0A1B0GVL6 79 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 A6NJY4 79 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 MRAP2Q96G30 205 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 SPRY4Q9C004 299 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 NEGR1Q7Z3B1 354 aa13.13□□□□□ -0.31
CLIP4-201ENST00000320081 TRAV21A0A0B4J279 112 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms