RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 NIPSNAP3BQ9BS92 247 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 SLC25A39Q9BZJ4 359 aaPredicted RBP3.84□□□□□ -1.79
CAST-201ENST00000309190 PPP1R2P9O14990 202 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 RPS10P46783 165 aaKnown RBP3.84□□□□□ -1.8
CAST-201ENST00000309190 PAX2Q02962 417 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 RAB31Q13636 194 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 MRGPRG-AS1Q2M3A8 158 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 OR11H6Q8NGC7 330 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 OR4F5Q8NH21 305 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 DYNLRB2Q8TF09 96 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 UBE2E2Q96LR5 201 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 PFDN5Q99471 154 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 TMEM208Q9BTX3 173 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 NPCDR1Q9BY65 106 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 ARL2-SNX15V9GYD0 113 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 V9GYV3 84 aa3.84□□□□□ -1.8
CAST-201ENST00000309190 TRAV9-1A0A075B6T8 112 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 F2Z2F3 143 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 HBE1P02100 147 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 LINC00614P0C842 121 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 MYCNOSP40205 109 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 TCL1AP56279 114 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 SPATA12Q7Z6I5 190 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 APRG1Q8IVJ8 170 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 STPG3Q8N7X2 389 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 LINC01006Q8NI28 216 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 Q8TAT8 98 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 LINC00574Q9H8X3 128 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 IGLC7A0M8Q6 106 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 A8MZ25 164 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 IGLV2-23P01705 113 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 RAB9AP51151 201 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 TEPPQ6URK8 271 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 LINC00305Q7Z4B0 112 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 C5orf56Q8N8D9 126 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 OR1L4Q8NGR5 311 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 MDFIQ99750 246 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 DERL1Q9BUN8 251 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 NPSP0C0P6 89 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 UBE2L3P68036 154 aaKnown RBP3.83□□□□□ -1.8
CAST-201ENST00000309190 PRR20EP86478 221 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 PRR20CP86479 221 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 PRR20DP86480 221 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 PRR20BP86481 221 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 PRR20AP86496 221 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 ZNF562Q6V9R5 426 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 NIT1Q86X76 327 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 FOXC2Q99958 501 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 WDR83OSQ9Y284 106 aa3.83□□□□□ -1.8
CAST-201ENST00000309190 NPIPB5A8MRT5 1133 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 C9JCJ5 164 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 K7EP13 123 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 DLEU1O43261 78 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 RNASE2P10153 161 aaKnown RBP3.82□□□□□ -1.8
CAST-201ENST00000309190 CDC34P49427 236 aaPredicted RBP3.82□□□□□ -1.8
CAST-201ENST00000309190 TREML4Q6UXN2 200 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 C12orf54Q6X4T0 127 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 LINC00482Q8N8I6 264 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 WIPF2Q8TF74 440 aaPredicted RBP3.82□□□□□ -1.8
CAST-201ENST00000309190 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 A0A087WW49 117 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 A0A0U1RRA0 63 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 FAM229AH3BQW9 127 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 ARL14EPLP0DKL9 152 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 MANBALQ9NQG1 85 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 ADMP35318 185 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 PRCDQ00LT1 54 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 AJUBAQ96IF1 538 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 THYN1Q9P016 225 aa3.82□□□□□ -1.8
CAST-201ENST00000309190 TRAV12-2A0A075B6T6 113 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 CTXND1A0A1B0GTU2 59 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 FBLL1A6NHQ2 334 aaKnown RBP3.81□□□□□ -1.8
CAST-201ENST00000309190 HTN3P15516 51 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 GATD1Q8NB37 220 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 OR52E5Q8NH55 327 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 MGST2Q99735 147 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 TMEM147Q9BVK8 224 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 PRO1933Q9H354 126 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 NPVFQ9HCQ7 196 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 YTHDF2Q9Y5A9 579 aaKnown RBP3.81□□□□□ -1.8
CAST-201ENST00000309190 SMIM27A0A1W2PRY6 76 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 MAP1LC3B2A6NCE7 125 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 KRTAP1-1Q07627 177 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 MINOS1Q5TGZ0 78 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 GDF5OSQ5U4N7 250 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 TMEM167AQ8TBQ9 72 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 RNF2Q99496 336 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 MAP1LC3BQ9GZQ8 125 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 NDUFA4L2Q9NRX3 87 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 MINOS1-NBL1R4GNA1 71 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 PGPA6NDG6 321 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 FNDC10F2Z333 226 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 H0Y8G0 127 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 CD5LO43866 347 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 CA1P00915 261 aaPredicted RBP3.81□□□□□ -1.8
CAST-201ENST00000309190 SLC25A5P05141 298 aaKnown RBP3.81□□□□□ -1.8
CAST-201ENST00000309190 ATP5G3P48201 142 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 USF2Q15853 346 aaPredicted RBP3.81□□□□□ -1.8
CAST-201ENST00000309190 KRTAP24-1Q3LI83 254 aa3.81□□□□□ -1.8
CAST-201ENST00000309190 SERTAD4-AS1Q5TG53 156 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms