RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 IGKV1-39P01597 117 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 IGKV1D-39P04432 117 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 DTX2Q86UW9 622 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 SVIPQ8NHG7 77 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 TPSG1Q9NRR2 321 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 CADP27708 2225 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 GAGE7O76087 117 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 GAGE12FP0CL80 117 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 GAGE12GP0CL81 117 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 GAGE12IP0CL82 117 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 RPRMLQ8N4K4 120 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 FLVCR1-AS1Q8TAF5 88 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 WIPF2Q8TF74 440 aaPredicted RBP10.23□□□□□ -0.77
USP38-201ENST00000307017 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 F5H768 121 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 SPATA25Q9BR10 227 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 Q6ZWC4 215 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 DAD1P61803 113 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
USP38-201ENST00000307017 IGHV1-24A0A0C4DH33 117 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 BUB1B-PAK6H3BSN5 160 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 FGF6P10767 208 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 INTS1Q8N201 2190 aaKnown RBP10.22□□□□□ -0.77
USP38-201ENST00000307017 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
USP38-201ENST00000307017 PNRC2Q9NPJ4 139 aaKnown RBP10.22□□□□□ -0.77
USP38-201ENST00000307017 COL24A1Q17RW2 1714 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 IGKV1D-17A0A075B6S4 117 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
USP38-201ENST00000307017 IL18BPO95998 194 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 C17orf77Q96MU5 243 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 GTF3C1Q12789 2109 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 ETDBQ3ZM63 59 aa10.22□□□□□ -0.77
USP38-201ENST00000307017 A0A0J9YY99 117 aa10.21□□□□□ -0.77
USP38-201ENST00000307017 RHPN1-AS1Q9BWJ2 59 aa10.21□□□□□ -0.77
USP38-201ENST00000307017 TMEM178BH3BS89 294 aa10.21□□□□□ -0.77
USP38-201ENST00000307017 RASL10AQ92737 203 aa10.21□□□□□ -0.77
USP38-201ENST00000307017 RNASE6Q93091 150 aaKnown RBP10.21□□□□□ -0.77
USP38-201ENST00000307017 OVOL1O14753 267 aa10.21□□□□□ -0.77
USP38-201ENST00000307017 AZU1P20160 251 aa10.21□□□□□ -0.77
USP38-201ENST00000307017 RPL36AP83881 106 aaKnown RBP10.21□□□□□ -0.77
USP38-201ENST00000307017 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.77
USP38-201ENST00000307017 BPESC1Q9GZL8 116 aa10.21□□□□□ -0.78
USP38-201ENST00000307017 Q6ZQT7 251 aa10.21□□□□□ -0.78
USP38-201ENST00000307017 SPACA3Q8IXA5 215 aa10.21□□□□□ -0.78
USP38-201ENST00000307017 DKK2Q9UBU2 259 aa10.21□□□□□ -0.78
USP38-201ENST00000307017 CD5LO43866 347 aa10.21□□□□□ -0.78
USP38-201ENST00000307017 A8MWP6 167 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 SCRT2Q9NQ03 307 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 ESM1Q9NQ30 184 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 LINC00271P0C7V0 271 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 RNF223E7ERA6 249 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 FAM120AOSQ5T036 256 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 LIME1Q9H400 295 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 CEP290O15078 2479 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 NRXN2Q9P2S2 1712 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 MRPL14Q6P1L8 145 aaKnown RBP10.2□□□□□ -0.78
USP38-201ENST00000307017 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.2□□□□□ -0.78
USP38-201ENST00000307017 VCYO14598 125 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 SAA4P35542 130 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 THAP8Q8NA92 274 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 C15orf53Q8NAA6 179 aa10.2□□□□□ -0.78
USP38-201ENST00000307017 Q86TA4 180 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 CRYGSP22914 178 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 UNQ6494/PRO21346Q6UXR6 183 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 SLC25A48Q6ZT89 311 aaKnown RBP10.19□□□□□ -0.78
USP38-201ENST00000307017 WDR86Q86TI4 376 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 F6UB75 175 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 Q6P435 159 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 A0A1B0GWJ7 208 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
USP38-201ENST00000307017 TNRC6BQ9UPQ9 1833 aaKnown RBP10.19□□□□□ -0.78
USP38-201ENST00000307017 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 SIGLEC9Q9Y336 463 aa10.19□□□□□ -0.78
USP38-201ENST00000307017 TRBV24-1A0A075B6N3 115 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 ATP6V0E1O15342 81 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 PLEKHB2Q96CS7 222 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 ZNF726P1Q15940 193 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
USP38-201ENST00000307017 MST1LQ2TV78 715 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 FAM166AQ6J272 317 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 WFDC11Q8NEX6 87 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 SS18Q15532 418 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 PPBPP02775 128 aa10.18□□□□□ -0.78
USP38-201ENST00000307017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.18□□□□□ -0.78
USP38-201ENST00000307017 IGKV2-29A2NJV5 120 aaPredicted RBP10.18□□□□□ -0.78
USP38-201ENST00000307017 CCL25O15444 150 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 CRYGCP07315 174 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 DKK4Q9UBT3 224 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 MYMXA0A1B0GTQ4 84 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 LRCOL1A6NCL2 159 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 A0A1W2PPI3 338 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 RLFQ13129 1914 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 CRLF1O75462 422 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 IFITM1P13164 125 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 IGLL1P15814 213 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 GATA1P15976 413 aaPredicted RBP10.17□□□□□ -0.78
USP38-201ENST00000307017 PLA2G5P39877 138 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 C1orf43Q9BWL3 253 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms