RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF586Q9NXT0 402 aa18.88■□□□□ 0.61
CDKN2A-201ENST00000304494 CDKN1BP46527 198 aa18.87■□□□□ 0.61
CDKN2A-201ENST00000304494 RPP25LQ8N5L8 163 aaKnown RBP18.87■□□□□ 0.61
CDKN2A-201ENST00000304494 ZNF705GA8MUZ8 300 aaPredicted RBP18.86■□□□□ 0.61
CDKN2A-201ENST00000304494 MPC2O95563 127 aa18.86■□□□□ 0.61
CDKN2A-201ENST00000304494 TSPOP30536 169 aa18.86■□□□□ 0.61
CDKN2A-201ENST00000304494 NDUFAF3Q9BU61 184 aa18.86■□□□□ 0.61
CDKN2A-201ENST00000304494 WDR61Q9GZS3 305 aaKnown RBP18.86■□□□□ 0.61
CDKN2A-201ENST00000304494 TRBV19A0A075B6N1 114 aa18.85■□□□□ 0.61
CDKN2A-201ENST00000304494 C17orf112F2Z3M2 114 aa18.85■□□□□ 0.61
CDKN2A-201ENST00000304494 PRB4P10163 310 aaPredicted RBP18.85■□□□□ 0.61
CDKN2A-201ENST00000304494 HIST1H1EP10412 219 aaKnown RBP18.85■□□□□ 0.61
CDKN2A-201ENST00000304494 LINC01587Q99440 93 aa18.85■□□□□ 0.61
CDKN2A-201ENST00000304494 ATP5SQ99766 215 aa18.85■□□□□ 0.61
CDKN2A-201ENST00000304494 PRAC2D3DTV9 90 aa18.84■□□□□ 0.61
CDKN2A-201ENST00000304494 PDE6HQ13956 83 aa18.84■□□□□ 0.61
CDKN2A-201ENST00000304494 GCSAMLQ5JQS6 135 aa18.84■□□□□ 0.61
CDKN2A-201ENST00000304494 MRPL53Q96EL3 112 aaKnown RBP18.84■□□□□ 0.61
CDKN2A-201ENST00000304494 TAS2R60P59551 318 aa18.83■□□□□ 0.6
CDKN2A-201ENST00000304494 DAD1P61803 113 aa18.83■□□□□ 0.6
CDKN2A-201ENST00000304494 FAM210BQ96KR6 192 aa18.83■□□□□ 0.6
CDKN2A-201ENST00000304494 C20orf144Q9BQM9 153 aa18.83■□□□□ 0.6
CDKN2A-201ENST00000304494 HSPB11Q9Y547 144 aa18.83■□□□□ 0.6
CDKN2A-201ENST00000304494 TIMM9Q9Y5J7 89 aa18.83■□□□□ 0.6
CDKN2A-201ENST00000304494 VPS13DQ5THJ4 4388 aa18.82■□□□□ 0.6
CDKN2A-201ENST00000304494 LYRM9A8MSI8 78 aa18.82■□□□□ 0.6
CDKN2A-201ENST00000304494 PRELID1Q9Y255 219 aa18.82■□□□□ 0.6
CDKN2A-201ENST00000304494 PTTG1O95997 202 aa18.81■□□□□ 0.6
CDKN2A-201ENST00000304494 PYYP10082 97 aa18.81■□□□□ 0.6
CDKN2A-201ENST00000304494 RPL12P30050 165 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-201ENST00000304494 SLC25A2Q9BXI2 301 aa18.81■□□□□ 0.6
CDKN2A-201ENST00000304494 MRPL32Q9BYC8 188 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-201ENST00000304494 PLA2G2EQ9NZK7 142 aa18.81■□□□□ 0.6
CDKN2A-201ENST00000304494 NPIPB6E9PJ23 425 aa18.8■□□□□ 0.6
CDKN2A-201ENST00000304494 PRM2P04554 102 aa18.8■□□□□ 0.6
CDKN2A-201ENST00000304494 ODF3Q96PU9 254 aa18.8■□□□□ 0.6
CDKN2A-201ENST00000304494 MBD2Q9UBB5 411 aa18.8■□□□□ 0.6
CDKN2A-201ENST00000304494 H7BYZ3 331 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 IFNA5P01569 189 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 AZU1P20160 251 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 LEPP41159 167 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 MIR17HGQ75NE6 70 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 BLNKQ8WV28 456 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 C16orf74Q96GX8 76 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 AAMDCQ9H7C9 122 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 ALG5Q9Y673 324 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 BIRC6Q9NR09 4857 aa18.79■□□□□ 0.6
CDKN2A-201ENST00000304494 NDUFB4O95168 129 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 P0DMU3 169 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 FAM231AP0DMU4 169 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 FAM231CP0DMU5 169 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 HTN1P15515 57 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 HTN3P15516 51 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 SCGB1C1Q8TD33 95 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 FAM167A-AS1Q96KT0 104 aa18.78■□□□□ 0.6
CDKN2A-201ENST00000304494 ZNF493Q6ZR52 646 aa18.77■□□□□ 0.6
CDKN2A-201ENST00000304494 PARD6GQ9BYG4 376 aaPredicted RBP18.77■□□□□ 0.6
CDKN2A-201ENST00000304494 OR51M1Q9H341 326 aa18.77■□□□□ 0.6
CDKN2A-201ENST00000304494 FUT9Q9Y231 359 aa18.77■□□□□ 0.6
CDKN2A-201ENST00000304494 PLAC8L1A1L4L8 177 aa18.76■□□□□ 0.59
CDKN2A-201ENST00000304494 M0R3E3 92 aa18.76■□□□□ 0.59
CDKN2A-201ENST00000304494 CT45A10P0DMU9 189 aa18.76■□□□□ 0.59
CDKN2A-201ENST00000304494 GFI1BQ5VTD9 330 aa18.76■□□□□ 0.59
CDKN2A-201ENST00000304494 NBEAP1P0C6P0 100 aa18.75■□□□□ 0.59
CDKN2A-201ENST00000304494 TMEM263Q8WUH6 116 aaKnown RBP18.75■□□□□ 0.59
CDKN2A-201ENST00000304494 PAXXQ9BUH6 204 aa18.75■□□□□ 0.59
CDKN2A-201ENST00000304494 SMIM3Q9BZL3 60 aa18.75■□□□□ 0.59
CDKN2A-201ENST00000304494 DEFB130BP0DP73 79 aa18.74■□□□□ 0.59
CDKN2A-201ENST00000304494 DEFB130AP0DP74 79 aa18.74■□□□□ 0.59
CDKN2A-201ENST00000304494 KIR3DS1Q14943 382 aa18.74■□□□□ 0.59
CDKN2A-201ENST00000304494 FFAR4Q5NUL3 377 aa18.74■□□□□ 0.59
CDKN2A-201ENST00000304494 EXOC3-AS1Q8N2X6 119 aa18.74■□□□□ 0.59
CDKN2A-201ENST00000304494 TIMM8BQ9Y5J9 83 aaPredicted RBP18.74■□□□□ 0.59
CDKN2A-201ENST00000304494 DNAH6Q9C0G6 4158 aa18.74■□□□□ 0.59
CDKN2A-201ENST00000304494 ICAM4Q14773 271 aa18.73■□□□□ 0.59
CDKN2A-201ENST00000304494 CCDC28AQ8IWP9 274 aa18.73■□□□□ 0.59
CDKN2A-201ENST00000304494 RNASE8Q8TDE3 154 aaKnown RBP18.73■□□□□ 0.59
CDKN2A-201ENST00000304494 RNF141Q8WVD5 230 aa18.73■□□□□ 0.59
CDKN2A-201ENST00000304494 LINC00477Q96M19 166 aa18.73■□□□□ 0.59
CDKN2A-201ENST00000304494 J3KRW8 73 aa18.72■□□□□ 0.59
CDKN2A-201ENST00000304494 OR7C2O60412 319 aa18.72■□□□□ 0.59
CDKN2A-201ENST00000304494 FXYD5Q96DB9 178 aa18.72■□□□□ 0.59
CDKN2A-201ENST00000304494 MED28Q9H204 178 aa18.72■□□□□ 0.59
CDKN2A-201ENST00000304494 OR10J4P0C629 311 aa18.71■□□□□ 0.59
CDKN2A-201ENST00000304494 ERCC8Q13216 396 aa18.71■□□□□ 0.59
CDKN2A-201ENST00000304494 POM121L12Q8N7R1 296 aa18.71■□□□□ 0.59
CDKN2A-201ENST00000304494 TRAV12-3A0A0B4J271 114 aa18.7■□□□□ 0.58
CDKN2A-201ENST00000304494 SLC25A5P05141 298 aaKnown RBP18.7■□□□□ 0.58
CDKN2A-201ENST00000304494 TAS2R45P59539 299 aa18.7■□□□□ 0.58
CDKN2A-201ENST00000304494 FCN2Q15485 313 aa18.7■□□□□ 0.58
CDKN2A-201ENST00000304494 KHDC3LQ587J8 217 aa18.7■□□□□ 0.58
CDKN2A-201ENST00000304494 FAM122CQ6P4D5 195 aa18.7■□□□□ 0.58
CDKN2A-201ENST00000304494 TMEM88Q6PEY1 159 aa18.7■□□□□ 0.58
CDKN2A-201ENST00000304494 FRAS1Q86XX4 4008 aa18.69■□□□□ 0.58
CDKN2A-201ENST00000304494 C9orf47Q6ZRZ4 202 aa18.69■□□□□ 0.58
CDKN2A-201ENST00000304494 PYGO2Q9BRQ0 406 aa18.69■□□□□ 0.58
CDKN2A-201ENST00000304494 AGPAT4-IT1Q9H0P7 198 aa18.69■□□□□ 0.58
CDKN2A-201ENST00000304494 NOP10Q9NPE3 64 aaKnown RBP18.69■□□□□ 0.58
CDKN2A-201ENST00000304494 CBY3A6NI87 242 aa18.68■□□□□ 0.58
CDKN2A-201ENST00000304494 ATP5G1P05496 136 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms