RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 K7EM74 188 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 EVI2AP22794 236 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 CKS2P33552 79 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 SRSF1Q07955 248 aaKnown RBP eCLIP10.63□□□□□ -0.717e-6■□□□□ 10.7
RPUSD4-201ENST00000298317 ATP1A1-AS1Q5TC04 95 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 H3BRN7 92 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 FCN3O75636 299 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 APELAP0DMC3 54 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 TMEM200BQ69YZ2 307 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 TTC9CQ8N5M4 171 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 PLXNB1O43157 2135 aa10.63□□□□□ -0.71
RPUSD4-201ENST00000298317 SPINK8P0C7L1 97 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 CYSLTR1Q9Y271 337 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 TMSB15BA0A087X1C1 80 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 C16orf97H3BN30 126 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 SH2D1AO60880 128 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 IGKCP01834 107 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 CRYGBP07316 175 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 PRB4P10163 310 aaPredicted RBP10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 ARPC1AQ92747 370 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 RASL11BQ9BPW5 248 aa10.62□□□□□ -0.71
RPUSD4-201ENST00000298317 CNIH1O95406 144 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 ETDBQ3ZM63 59 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 URB1O60287 2271 aaKnown RBP10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 TEX22C9J3V5 150 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 I3L2K1 104 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 M0R3E3 92 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 IGKV1-17P01599 117 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 ZNF502Q8TBZ5 544 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 PRO0461Q9UI25 63 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 INTS1Q8N201 2190 aaKnown RBP10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 CADP27708 2225 aa10.61□□□□□ -0.71
RPUSD4-201ENST00000298317 NPIPB5A8MRT5 1133 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 H3BMG7 143 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 FCER1GP30273 86 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 RPL32P62910 135 aaKnown RBP10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 MAP1LC3AQ9H492 121 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 B5MCH6 92 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 INSL3P51460 131 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 SRSF6Q13247 344 aaKnown RBP10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 TAL2Q16559 108 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 C3orf36Q3SXR2 165 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 RNF185Q96GF1 192 aa10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 SPENQ96T58 3664 aaKnown RBP10.6□□□□□ -0.71
RPUSD4-201ENST00000298317 CEACAM4O75871 244 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 LEPP41159 167 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 KLF17Q5JT82 389 aaPredicted RBP10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 GTSCR1Q86UQ5 136 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 SMIM20Q8N5G0 67 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 CDIP1Q9H305 208 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 IGHV3-72A0A0B4J1Y9 119 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 K7EMI3 77 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 ENSAO43768 121 aaKnown RBP10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 RBP4P02753 201 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 IGLC6P0CF74 106 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 CNTFRP26992 372 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 TWIST1Q15672 202 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 C20orf78Q9BR46 151 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 SIGLEC9Q9Y336 463 aa10.59□□□□□ -0.71
RPUSD4-201ENST00000298317 DPM2O94777 84 aa10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 MT-ATP8P03928 68 aa10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 ANAPC13Q9BS18 74 aa10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 SVILO95425 2214 aa10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 ATP5LO75964 103 aa10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 PRSS1P07477 247 aa10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 WT1P19544 449 aaPredicted RBP10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
RPUSD4-201ENST00000298317 EGR2P11161 476 aaPredicted RBP10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 PDE6HQ13956 83 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 AMTNQ6UX39 209 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 SEM1Q6ZVN7 128 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 FOXC2Q99958 501 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 NXT2Q9NPJ8 142 aaKnown RBP10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 DSPP15924 2871 aaKnown RBP10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 TMEM8BA6NDV4 472 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 DLX6P56179 175 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 KLRD1Q13241 179 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 RRN3P1Q2M238 152 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 TDHQ8IZJ6 230 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 MAPKAPK5-AS1Q8N8E1 139 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 ZNF491Q8N8L2 437 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 UFC1Q9Y3C8 167 aa10.57□□□□□ -0.72
RPUSD4-201ENST00000298317 GAS8-AS1O95177 125 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 PLGLAQ15195 96 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 ZNF474Q6S9Z5 364 aaPredicted RBP10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 PRRG2O14669 202 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 ARL3P36405 182 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 PPP1R27Q86WC6 154 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 RNF125Q96EQ8 232 aa10.56□□□□□ -0.72
RPUSD4-201ENST00000298317 PSMG3-AS1Q96PY0 264 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms