RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 SIT1Q9Y3P8 196 aa9.4□□□□□ -0.9
SNIP1-201ENST00000296215 IGKV1-27A0A075B6S5 117 aa9.4□□□□□ -0.9
SNIP1-201ENST00000296215 FAM120AOSQ5T036 256 aa9.4□□□□□ -0.9
SNIP1-201ENST00000296215 SLC25A29Q8N8R3 303 aa9.4□□□□□ -0.9
SNIP1-201ENST00000296215 OVOL2Q9BRP0 275 aa9.4□□□□□ -0.9
SNIP1-201ENST00000296215 IGKV2D-26A0A0A0MRZ7 120 aa9.4□□□□□ -0.91
SNIP1-201ENST00000296215 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.91
SNIP1-201ENST00000296215 TRIOBPQ9H2D6 2365 aa9.4□□□□□ -0.91
SNIP1-201ENST00000296215 RPL27AP46776 148 aaKnown RBP9.4□□□□□ -0.91
SNIP1-201ENST00000296215 MLST8Q9BVC4 326 aa9.4□□□□□ -0.91
SNIP1-201ENST00000296215 KIAA1549Q9HCM3 1950 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 OVOL1O14753 267 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 CELA2AP08217 269 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 TDRD15B5MCY1 1934 aaKnown RBP9.39□□□□□ -0.91
SNIP1-201ENST00000296215 PRSS46E5RG02 174 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 NYNRINQ9P2P1 1898 aaKnown RBP9.39□□□□□ -0.91
SNIP1-201ENST00000296215 PTPRDP23468 1912 aa9.39□□□□□ -0.91
SNIP1-201ENST00000296215 PSMB8P28062 276 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
SNIP1-201ENST00000296215 KLHL30-AS1Q8NEE0 82 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 PIFOQ8TCI5 191 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 SBF2Q86WG5 1849 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 LILRA5A6NI73 299 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 J3QQQ9 107 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 ZNHIT1O43257 154 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 RPS19BP1Q86WX3 136 aaKnown RBP9.38□□□□□ -0.91
SNIP1-201ENST00000296215 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 NSUN5P1Q3KNT7 163 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 C2orf66Q6UXQ4 117 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 MDC1Q14676 2089 aaKnown RBP9.38□□□□□ -0.91
SNIP1-201ENST00000296215 IGKV1-6A0A0C4DH72 117 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 SH2D1AO60880 128 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 TRIP6Q15654 476 aaKnown RBP9.38□□□□□ -0.91
SNIP1-201ENST00000296215 CNEP1R1Q8N9A8 125 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 CFHR4Q92496 578 aa9.38□□□□□ -0.91
SNIP1-201ENST00000296215 TRAV12-1A0A0B4J245 112 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 SAA1P0DJI8 122 aaPredicted RBP9.37□□□□□ -0.91
SNIP1-201ENST00000296215 ERCC8Q13216 396 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 METTL26Q96S19 204 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 CXXC4Q9H2H0 198 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 TRGV8A0A0C4DH27 118 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 H0Y8X5 98 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 HAMPP81172 84 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 SDIM1Q6ZPB5 146 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 FAM90A1Q86YD7 464 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 SERP1Q9Y6X1 66 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 ANKRD36A6QL64 1941 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 PHF3Q92576 2039 aaKnown RBP9.37□□□□□ -0.91
SNIP1-201ENST00000296215 TMEM92Q6UXU6 159 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 RASL10AQ92737 203 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 ICOSQ9Y6W8 199 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 TRPM6Q9BX84 2022 aa9.37□□□□□ -0.91
SNIP1-201ENST00000296215 IQCF6A8MYZ5 107 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 PLA2G5P39877 138 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 C19orf54Q5BKX5 351 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 FAM74A4Q5TZK3 123 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 LEAP2Q969E1 77 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 IGF2BP2-AS1Q96M15 143 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
SNIP1-201ENST00000296215 NUP98P52948 1817 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 M0R1W7 72 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 ELSPBP1Q96BH3 223 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 A0A1B0GXF2 115 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 C5orf63A6NC05 138 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 ELANEP08246 267 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 ODF3L1Q8IXM7 274 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 ASXL3Q9C0F0 2248 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 TNRC6CQ9HCJ0 1690 aaKnown RBP9.36□□□□□ -0.91
SNIP1-201ENST00000296215 DUTP33316 252 aaKnown RBP9.36□□□□□ -0.91
SNIP1-201ENST00000296215 LY6DQ14210 128 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 SLC25A45Q8N413 288 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 TMEM86BQ8N661 226 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
SNIP1-201ENST00000296215 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
SNIP1-201ENST00000296215 PRCDQ00LT1 54 aa9.35□□□□□ -0.91
SNIP1-201ENST00000296215 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
SNIP1-201ENST00000296215 LOC285556D6RIA3 1793 aa9.35□□□□□ -0.91
SNIP1-201ENST00000296215 UBE2L6O14933 153 aa9.35□□□□□ -0.91
SNIP1-201ENST00000296215 TRAV3A0A0B4J244 114 aa9.35□□□□□ -0.91
SNIP1-201ENST00000296215 DEFB133Q30KQ1 61 aa9.35□□□□□ -0.91
SNIP1-201ENST00000296215 IGHV1OR21-1A0A087WYE8 117 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 IGHV1OR15-9A0A0B4J2B8 117 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 ZNF497Q6ZNH5 498 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 MAPKAPK5-AS1Q8N8E1 139 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 SIPA1L3O60292 1781 aaPredicted RBP9.34□□□□□ -0.91
SNIP1-201ENST00000296215 CRPP02741 224 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 NHLRC4P0CG21 123 aaPredicted RBP9.34□□□□□ -0.91
SNIP1-201ENST00000296215 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 LINC01587Q99440 93 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 PLXND1Q9Y4D7 1925 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 LYPD6Q86Y78 171 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 DEFB119Q8N690 84 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 TIMM21Q9BVV7 248 aa9.34□□□□□ -0.91
SNIP1-201ENST00000296215 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 MUSTN1Q8IVN3 82 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms