RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 NDUFA13Q9P0J0 144 aa12.18□□□□□ -0.46
TFF3-201ENST00000291525 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
TFF3-201ENST00000291525 H3BTX0 84 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 ZNF253O75346 499 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 PRB4P10163 310 aaPredicted RBP12.17□□□□□ -0.46
TFF3-201ENST00000291525 S100A11P31949 105 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 S100A10P60903 97 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 BAXQ07812 192 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 GFI1BQ5VTD9 330 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 MORN5Q5VZ52 161 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 SEC22CQ9BRL7 303 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 DNAH17Q9UFH2 4485 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 DNAH2Q9P225 4427 aa12.17□□□□□ -0.46
TFF3-201ENST00000291525 NBDYA0A0U1RRE5 68 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 FAM24AA6NFZ4 105 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 SNURFLB1AK76 121 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 RLN2P04090 185 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 RPL29P47914 159 aaKnown RBP12.16□□□□□ -0.46
TFF3-201ENST00000291525 SULT1A1P50225 295 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 VWC2Q2TAL6 325 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 SAT2Q96F10 170 aaPredicted RBP12.16□□□□□ -0.46
TFF3-201ENST00000291525 CCDC32Q9BV29 185 aa12.16□□□□□ -0.46
TFF3-201ENST00000291525 LYRM2Q9NU23 88 aaPredicted RBP12.16□□□□□ -0.46
TFF3-201ENST00000291525 PKHD1P08F94 4074 aa12.15□□□□□ -0.46
TFF3-201ENST00000291525 UBE2L5PA0A1B0GUS4 154 aa12.15□□□□□ -0.46
TFF3-201ENST00000291525 PRAC2D3DTV9 90 aa12.15□□□□□ -0.46
TFF3-201ENST00000291525 H3BQ15 152 aa12.15□□□□□ -0.46
TFF3-201ENST00000291525 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
TFF3-201ENST00000291525 MRPL53Q96EL3 112 aaKnown RBP12.15□□□□□ -0.46
TFF3-201ENST00000291525 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
TFF3-201ENST00000291525 SLC39A9Q9NUM3 307 aa12.15□□□□□ -0.46
TFF3-201ENST00000291525 KIAA1109Q2LD37 5005 aa12.15□□□□□ -0.47
TFF3-201ENST00000291525 NPIPB6E9PJ23 425 aa12.14□□□□□ -0.47
TFF3-201ENST00000291525 OR5I1Q13606 314 aa12.14□□□□□ -0.47
TFF3-201ENST00000291525 ATP6V1FQ16864 119 aa12.14□□□□□ -0.47
TFF3-201ENST00000291525 C6orf223Q8N319 242 aa12.14□□□□□ -0.47
TFF3-201ENST00000291525 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
TFF3-201ENST00000291525 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
TFF3-201ENST00000291525 C11orf1Q9H5F2 150 aa12.14□□□□□ -0.47
TFF3-201ENST00000291525 TRAV5A0A0B4J249 113 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 J3KRW8 73 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 MPDU1O75352 247 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 M6PRP20645 277 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 FGF7P21781 194 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 LINC00612Q8N6U2 182 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 CHAC2Q8WUX2 184 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 ZNF503Q96F45 646 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 ZNF586Q9NXT0 402 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 PRELID1Q9Y255 219 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 LINC00588Q9Y4M8 146 aa12.13□□□□□ -0.47
TFF3-201ENST00000291525 MUC4Q99102 2169 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 TRAV12-3A0A0B4J271 114 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 IGSF23A1L1A6 192 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 GAGE7O76087 117 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 SLC25A5P05141 298 aaKnown RBP12.12□□□□□ -0.47
TFF3-201ENST00000291525 GAGE12FP0CL80 117 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 GAGE12GP0CL81 117 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 GAGE12IP0CL82 117 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 RAB32Q13637 225 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 PDE6HQ13956 83 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 SSX7Q7RTT5 188 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 GPN1Q9HCN4 374 aaPredicted RBP12.12□□□□□ -0.47
TFF3-201ENST00000291525 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
TFF3-201ENST00000291525 TRBV19A0A075B6N1 114 aa12.11□□□□□ -0.47
TFF3-201ENST00000291525 TRAV26-1A0A087WT03 109 aa12.11□□□□□ -0.47
TFF3-201ENST00000291525 HIST1H1EP10412 219 aaKnown RBP12.11□□□□□ -0.47
TFF3-201ENST00000291525 TTC32Q5I0X7 151 aa12.11□□□□□ -0.47
TFF3-201ENST00000291525 ZNF680Q8NEM1 530 aa12.11□□□□□ -0.47
TFF3-201ENST00000291525 RXFP4Q8TDU9 374 aa12.11□□□□□ -0.47
TFF3-201ENST00000291525 AAMDCQ9H7C9 122 aa12.11□□□□□ -0.47
TFF3-201ENST00000291525 C7orf71A4D174 169 aa12.1□□□□□ -0.47
TFF3-201ENST00000291525 DAZ2Q13117 558 aaKnown RBP12.1□□□□□ -0.47
TFF3-201ENST00000291525 ZNF575Q86XF7 245 aa12.1□□□□□ -0.47
TFF3-201ENST00000291525 H3BNG1 76 aa12.09□□□□□ -0.47
TFF3-201ENST00000291525 IL15RAQ13261 267 aa12.09□□□□□ -0.47
TFF3-201ENST00000291525 LINC00477Q96M19 166 aa12.09□□□□□ -0.47
TFF3-201ENST00000291525 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
TFF3-201ENST00000291525 KCNIP2Q9NS61 270 aa12.09□□□□□ -0.47
TFF3-201ENST00000291525 A0A0J9YY99 117 aa12.08□□□□□ -0.48
TFF3-201ENST00000291525 TNP2Q05952 138 aa12.08□□□□□ -0.48
TFF3-201ENST00000291525 LINC00299Q6ZSB3 139 aa12.08□□□□□ -0.48
TFF3-201ENST00000291525 S100ZQ8WXG8 99 aa12.08□□□□□ -0.48
TFF3-201ENST00000291525 SLC25A31Q9H0C2 315 aa12.08□□□□□ -0.48
TFF3-201ENST00000291525 Q9H8V8 135 aa12.08□□□□□ -0.48
TFF3-201ENST00000291525 PKD1P98161 4303 aa12.07□□□□□ -0.48
TFF3-201ENST00000291525 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
TFF3-201ENST00000291525 C16orf90A8MZG2 172 aa12.07□□□□□ -0.48
TFF3-201ENST00000291525 M0R3E3 92 aa12.07□□□□□ -0.48
TFF3-201ENST00000291525 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
TFF3-201ENST00000291525 LINC00467Q9BRT7 94 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms