RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RANP62826 216 aaKnown RBP4.77□□□□□ -1.65
CD44-204ENST00000279452 ICAM4Q14773 271 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 AKR1C8PQ5T2L2 129 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 Q6ZNX1 250 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 AKAP14Q86UN6 197 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 BAP18Q8IXM2 172 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 PHYHIPLQ96FC7 376 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 HYLS1Q96M11 299 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 PSMG3Q9BT73 122 aaPredicted RBP4.77□□□□□ -1.65
CD44-204ENST00000279452 ZNF471Q9BX82 626 aaPredicted RBP4.77□□□□□ -1.65
CD44-204ENST00000279452 ACTR3CQ9C0K3 210 aaPredicted RBP4.77□□□□□ -1.65
CD44-204ENST00000279452 EDA2RQ9HAV5 297 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 GOLT1BQ9Y3E0 138 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 CMYA5Q8N3K9 4069 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 SORL1Q92673 2214 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 TRAV12-2A0A075B6T6 113 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 IGKV2-40A0A087WW87 121 aaPredicted RBP4.76□□□□□ -1.65
CD44-204ENST00000279452 IGHV4-28A0A0C4DH34 117 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 A0A0D9SG52 128 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 PRAC2D3DTV9 90 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 BCL2L11O43521 198 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 ZNF253O75346 499 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 NDUFB4O95168 129 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 IGKV2D-40P01614 121 aaPredicted RBP4.76□□□□□ -1.65
CD44-204ENST00000279452 AMBPP02760 352 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 ARL14EPLP0DKL9 152 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 HTN1P15515 57 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 EMP1P54849 157 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 SERF2P84101 59 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 PDE6HQ13956 83 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 ZNF345Q14585 488 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 FAM74A1Q5RGS3 127 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 KCNRGQ8N5I3 272 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 OR11H4Q8NGC9 324 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 IL17DQ8TAD2 202 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 CMTM2Q8TAZ6 248 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 FXYD5Q96DB9 178 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 SAT2Q96F10 170 aaPredicted RBP4.76□□□□□ -1.65
CD44-204ENST00000279452 FAM167A-AS1Q96KT0 104 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 Q9H3A6 140 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 PRELID1Q9Y255 219 aa4.76□□□□□ -1.65
CD44-204ENST00000279452 HMSDA8MTL9 139 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 C3orf84H3BNL1 204 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 HBE1P02100 147 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 GIG44P09565 113 aaPredicted RBP4.75□□□□□ -1.65
CD44-204ENST00000279452 MIFP14174 115 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 TSPOP30536 169 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 LEPP41159 167 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 EIF5AP63241 154 aaKnown RBP4.75□□□□□ -1.65
CD44-204ENST00000279452 ERCC8Q13216 396 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 TMEM78Q5T7P6 136 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 PQLC2Q6ZP29 291 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 TMUB2Q71RG4 321 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 RPP25LQ8N5L8 163 aaKnown RBP4.75□□□□□ -1.65
CD44-204ENST00000279452 C11orf45Q8TAV5 145 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 RAB24Q969Q5 203 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 MRPL53Q96EL3 112 aaKnown RBP4.75□□□□□ -1.65
CD44-204ENST00000279452 ZNF503Q96F45 646 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 ST6GAL2Q96JF0 529 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 IGF2BP2-AS1Q96M15 143 aa4.75□□□□□ -1.65
CD44-204ENST00000279452 LOC102723971A0A1B0GUV8 181 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 A0A1B0GV50 99 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 PGPA6NDG6 321 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 ZNF705EA8MWA4 302 aaPredicted RBP4.74□□□□□ -1.65
CD44-204ENST00000279452 NPIPB6E9PJ23 425 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 CXorf1O96002 111 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 SLC25A5P05141 298 aaKnown RBP4.74□□□□□ -1.65
CD44-204ENST00000279452 STAG3L2P0CL84 134 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 STAG3L3P0CL85 134 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 TPT1P13693 172 aaKnown RBP4.74□□□□□ -1.65
CD44-204ENST00000279452 GCHFRP30047 84 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 CDKN1BP46527 198 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 FGF8P55075 233 aaPredicted RBP4.74□□□□□ -1.65
CD44-204ENST00000279452 NANOS2P60321 138 aaKnown RBP4.74□□□□□ -1.65
CD44-204ENST00000279452 RRN3P1Q2M238 152 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 ZFP69Q49AA0 526 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 AMTNQ6UX39 209 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 TCTE3Q8IZS6 198 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 Q8NAQ8 132 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 CSNK1G2-AS1Q8NCQ2 148 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 Q8TAT8 98 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 FAM213BQ8TBF2 198 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 CLUHP3Q96NS8 147 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 LINC01587Q99440 93 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 C11orf68Q9H3H3 251 aaKnown RBP4.74□□□□□ -1.65
CD44-204ENST00000279452 OTORQ9NRC9 128 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 CYTL1Q9NRR1 136 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 TMEM167BQ9NRX6 74 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 X6R8D5 127 aa4.74□□□□□ -1.65
CD44-204ENST00000279452 TRAV12-3A0A0B4J271 114 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 CTXND1A0A1B0GTU2 59 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 A0A1B0GVG6 124 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 MAP1LC3B2A6NCE7 125 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 ZNF705GA8MUZ8 300 aaPredicted RBP4.73□□□□□ -1.65
CD44-204ENST00000279452 C1QBP02746 253 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 GPX1P07203 203 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 RBMY1A1P0DJD3 496 aaKnown RBP4.73□□□□□ -1.65
CD44-204ENST00000279452 RBMY1CP0DJD4 496 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 CT45A10P0DMU9 189 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 UBE2G2P60604 165 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms