RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FLG2Q5D862 2391 aaPredicted RBP4.69□□□□□ -1.66
VCAN-201ENST00000265077 HIST1H4AP62805 103 aaKnown RBP4.68□□□□□ -1.66
VCAN-201ENST00000265077 C3orf56Q8N813 242 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 INAFM2P0DMQ5 153 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 LSM4Q9Y4Z0 139 aaKnown RBP4.68□□□□□ -1.66
VCAN-201ENST00000265077 A0A0A6YYD4 124 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 FAM236AA0A1B0GUQ0 79 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 FAM236BA0A1B0GV22 79 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 ANKRD29Q8N6D5 301 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 C8orf46Q8TAG6 207 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 PRR32B1ATL7 298 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 KLF5Q13887 457 aaPredicted RBP4.68□□□□□ -1.66
VCAN-201ENST00000265077 A0A087WV48 116 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 M0R2P5 195 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 SRSF2Q01130 221 aaKnown RBP4.68□□□□□ -1.66
VCAN-201ENST00000265077 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
VCAN-201ENST00000265077 OR11H6Q8NGC7 330 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 IMMP1LQ96LU5 166 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 ATP5G1P05496 136 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 RFPL3SP0C7P2 107 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 SYNJ2BPP57105 145 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 C12orf74Q32Q52 190 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 NEU4Q8WWR8 484 aaPredicted RBP4.68□□□□□ -1.66
VCAN-201ENST00000265077 OR13A1Q8NGR1 328 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 IGKV3D-15A0A087WSY6 115 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 CSRP2Q16527 193 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 OVOL2Q9BRP0 275 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 PRR31Q5SQ13 230 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 UTF1Q5T230 341 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 DUX3Q96PT4 197 aa4.68□□□□□ -1.66
VCAN-201ENST00000265077 NBR2O15453 112 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 FLVCR1-AS1Q8TAF5 88 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 ZC2HC1AQ96GY0 325 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 DNAJC30Q96LL9 226 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 NDUFA7O95182 113 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 CELA3BP08861 270 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 GLMPQ8WWB7 406 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 DEPPQ9NTK1 212 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 ETV2O00321 342 aaPredicted RBP4.67□□□□□ -1.66
VCAN-201ENST00000265077 RNASE4P34096 147 aaKnown RBP4.67□□□□□ -1.66
VCAN-201ENST00000265077 RNF125Q96EQ8 232 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 PKIGQ9Y2B9 76 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 TRAV13-1A0A0B4J241 112 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 RBM3P98179 157 aaKnown RBP4.67□□□□□ -1.66
VCAN-201ENST00000265077 TRAV21A0A0B4J279 112 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1D-33P01593 117 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1-33P01594 117 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 TREML4Q6UXN2 200 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 CRYGSP22914 178 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 ZNF138P52744 262 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 EPG5Q9HCE0 2579 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 C17orf100A8MU93 164 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 MYOD1P15172 320 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 TFF2Q03403 129 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 PSG7Q13046 419 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 TRAV25A0A0B4J276 109 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 TGFBR3LH3BV60 316 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 LRRC75A-AS1Q8N1F1 130 aa4.67□□□□□ -1.66
VCAN-201ENST00000265077 SAA1P0DJI8 122 aaPredicted RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 LGALS9BQ3B8N2 356 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 LGALS9CQ6DKI2 356 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 NEGR1Q7Z3B1 354 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 TMEM219Q86XT9 240 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 SMIM27A0A1W2PRY6 76 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 RBMY1BA6NDE4 496 aaKnown RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 RBMY1EA6NEQ0 496 aaKnown RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 RBMY1DP0C7P1 496 aaKnown RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 RBMY1A1P0DJD3 496 aaKnown RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 RBMY1CP0DJD4 496 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 LINC01545Q5VT33 79 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 TMEM42Q69YG0 159 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 CENPVQ7Z7K6 275 aaPredicted RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 IGKV3-15P01624 115 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 SLC25A39Q9BZJ4 359 aaPredicted RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 IGHV1-2P23083 117 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 C1orf195Q5TG92 126 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 FAM57AQ8TBR7 257 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 TMEM243Q9BU79 118 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 GFRA4Q9GZZ7 299 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 D6R8Y8 96 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 STPG1Q5TH74 334 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 ZNF837Q96EG3 531 aaPredicted RBP4.66□□□□□ -1.66
VCAN-201ENST00000265077 VPREB3Q9UKI3 123 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1-12A0A0C4DH73 117 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1D-12P01611 117 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 HERVK_113P63121 156 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 SSC4DQ8WTU2 575 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 PLEKHB2Q96CS7 222 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 CENPFP49454 3210 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 SPATA12Q7Z6I5 190 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 FAM216BQ8N7L0 139 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 JMJD8Q96S16 334 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 HIGD1BQ9P298 99 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 SPACA3Q8IXA5 215 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 C20orf173Q96LM9 149 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 C20orf78Q9BR46 151 aa4.66□□□□□ -1.66
VCAN-201ENST00000265077 KNCNA6PVL3 124 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 WIPF2Q8TF74 440 aaPredicted RBP4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms